RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GOLGA8OA6NCC3 632 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 YJEFN3A6XGL0 299 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 GOLGA8NF8WBI6 632 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 SLCO1B7G3V0H7 640 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF701M0R085 212 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 AIM2O14862 343 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 FYNP06241 537 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 HNRNPCP07910 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PCSK6P29122 969 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TPP2P29144 1249 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PPARGP37231 505 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 THOP1P52888 689 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PRKAA2P54646 552 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 NUP107P57740 925 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PITX1P78337 314 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TXNL4AP83876 142 aaKnown RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TSPY1Q01534 308 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 DSC1Q08554 894 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 NOMO2Q5JPE7 1267 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 CLLU1OSQ5K130 101 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 HEATR6Q6AI08 1181 aaKnown RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 IYDQ6PHW0 289 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 LRRC8DQ7L1W4 858 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 BBS5Q8N3I7 341 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF781Q8N8C0 355 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF296Q8WUU4 475 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TOP1MTQ969P6 601 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 CDRT15Q96T59 188 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 OSBPL11Q9BXB4 747 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 NUF2Q9BZD4 464 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ILKAPQ9H0C8 392 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 RRN3Q9NYV6 651 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TMEM216Q9P0N5 145 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 USP3Q9Y6I4 520 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 WDR27A2RRH5 827 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 HACD1B0YJ81 288 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TMEM189-UBE2V1I3L0A0 370 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 HDAC3O15379 428 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TRIM13O60858 407 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ZMPSTE24O75844 475 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 H6PDO95479 791 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 LTFP02788 710 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ITGB1P05556 798 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 APOA4P06727 396 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 COL6A1P12109 1028 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 SELPP16109 830 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 BDNFP23560 247 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ACADVLP49748 655 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 AIF1P55008 147 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TMED1Q13445 227 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PEX6Q13608 980 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 SLC9B1Q4ZJI4 515 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 C6orf52Q5T4I8 152 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ATG14Q6ZNE5 492 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 CHERPQ8IWX8 916 aaKnown RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 RNF168Q8IYW5 571 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 SCML4Q8N228 414 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TRIML2Q8N7C3 387 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 TDRD5Q8NAT2 981 aaKnown RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 BHLHE22Q8NFJ8 381 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 OR10T2Q8NGX3 314 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF597Q96LX8 424 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 RHOBTB2Q9BYZ6 727 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 MAGEB5Q9BZ81 275 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 COPS7BQ9H9Q2 264 aaPredicted RBP9.05□□□□□ -0.96
GPNMB-202ENST00000381990 EFCAB1Q9HAE3 211 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 SH3GLB1Q9Y371 365 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 NR2E3Q9Y5X4 410 aa9.05□□□□□ -0.96
GPNMB-202ENST00000381990 PTPRDP23468 1912 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 MATN2O00339 956 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 DDHD2O94830 711 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 MPOP05164 745 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 POLBP06746 335 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 GOT1P17174 413 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SERPINB5P36952 375 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 ALDH3B2P48448 385 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 RABGGTBP53611 331 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 GBE1Q04446 702 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 NME3Q13232 169 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PM20D1Q6GTS8 502 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SNX32Q86XE0 403 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF280BQ86YH2 543 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 LILRA2Q8N149 483 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PYROXD2Q8N2H3 581 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 CNTD1Q8N815 330 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 TMEM102Q8N9M5 508 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 HM13Q8TCT9 377 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 NTAN1Q96AB6 310 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PGAP3Q96FM1 320 aaPredicted RBP9.04□□□□□ -0.96
GPNMB-202ENST00000381990 CCT7Q99832 543 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 SNX15Q9NRS6 342 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 PIGVQ9NUD9 493 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 TMLHEQ9NVH6 421 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 TMEM161AQ9NX61 479 aa9.04□□□□□ -0.96
GPNMB-202ENST00000381990 VTI1BQ9UEU0 232 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms