RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GALNT7Q86SF2 657 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MIB1Q86YT6 1006 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 BBS5Q8N3I7 341 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 KIF2BQ8N4N8 673 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 FBXO22Q8NEZ5 403 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 OR6Y1Q8NGX8 325 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 AZIN2Q96A70 460 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TADA1Q96BN2 335 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 PTCD3Q96EY7 689 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ZNF419Q96HQ0 510 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 EPHX3Q9H6B9 360 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 NT5MQ9NPB1 228 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ZNF212Q9UDV6 495 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 DNMT3LQ9UJW3 386 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MAGED2Q9UNF1 606 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC27A5Q9Y2P5 690 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 CDY1Q9Y6F8 540 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 CNTN5O94779 1100 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 SNUPNO95149 360 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 CBX6O95503 412 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 TOP3BO95985 862 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 SERPINA6P08185 405 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 BMP1P13497 986 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 ALOX15P16050 662 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 CCND1P24385 295 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 CRABP2P29373 138 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 ATP5C1P36542 298 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 PBX3P40426 434 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 CD151P48509 253 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 ALDH7A1P49419 539 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 AQP5P55064 265 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 ABCE1P61221 599 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 IRX4P78413 519 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 DUSP4Q13115 394 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 SERINC3Q13530 473 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 GRM3Q14832 879 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 PPM1JQ5JR12 505 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 TMEM240Q5SV17 173 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 TMCO4Q5TGY1 634 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 RSPO2Q6UXX9 243 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 TFAP2DQ7Z6R9 452 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 C10orf107Q8IVU9 208 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 RNF168Q8IYW5 571 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 C2CD4AQ8NCU7 369 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 PEX13Q92968 403 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 IGSF8Q969P0 613 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 PLD4Q96BZ4 506 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 B3GALT6Q96L58 329 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 GAS2L1Q99501 681 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 NMRAL1Q9HBL8 299 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 BAIAP2L1Q9UHR4 511 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 TRIM33Q9UPN9 1127 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 DNAJC16Q9Y2G8 782 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 PCDHB12Q9Y5F1 795 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
POLR2J3-201ENST00000379340 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 A0A087X1B8 175 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ACSL4O60488 711 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 PRAMEF11O60813 436 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 TRIM13O60858 407 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 SOAT2O75908 522 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 VAPBO95292 243 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ACRP10323 421 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ESRRAP11474 423 aaPredicted RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ATF6P18850 670 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 IGFBP4P22692 258 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 OR1E1P30953 314 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC11A2P49281 568 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 KCNQ1P51787 676 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 POU4F1Q01851 419 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ITKQ08881 620 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC10A7Q0GE19 358 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 USP10Q14694 798 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 LBRQ14739 615 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 RABGAP1LQ5R372 815 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 WASHC2DQ5SRD0 308 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 TSTD2Q5T7W7 516 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 CES4AQ5XG92 561 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 TPGS2Q68CL5 300 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ESRP1Q6NXG1 681 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ZCCHC23Q6ZST2 131 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 RAPH1Q70E73 1250 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF354CQ86Y25 554 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ARHGAP24Q8N264 748 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 CFAP61Q8NHU2 1237 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 GPR152Q8TDT2 470 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 STON2Q8WXE9 905 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 PABPC5Q96DU9 382 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 ATXN7L3BQ96GX2 97 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 TOX2Q96NM4 488 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 BTBD10Q9BSF8 475 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 LRFN3Q9BTN0 628 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 TBC1D10AQ9BXI6 508 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms