RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 VOPP1Q96AW1 172 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ARRDC3Q96B67 414 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 EXOC2Q96KP1 924 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 IL12RB2Q99665 862 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 POLR1EQ9GZS1 481 aaKnown RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ATP13A3Q9H7F0 1226 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 RBM22Q9NW64 420 aaKnown RBP eCLIP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 SERGEFQ9UGK8 458 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 JRKLQ9Y4A0 524 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 PCDHGA5Q9Y5G8 931 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 THADAQ6YHU6 1953 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 MUSKO15146 869 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 KIF5CO60282 957 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 UGT2B4P06133 528 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 SERPINA4P29622 427 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 ACSL1P33121 698 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 RGRP47804 291 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 SCNN1BP51168 640 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 NEK3P51956 506 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 NOMO1Q15155 1222 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 ALG1LQ6GMV1 187 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 PGBD5Q8N414 524 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 OR2T34Q8NGX1 318 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 HERPUD2Q9BSE4 406 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 GPR174Q9BXC1 333 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 TLR10Q9BXR5 811 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 SUV39H2Q9H5I1 410 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 NT5MQ9NPB1 228 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
CKAP2-202ENST00000378034 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
CKAP2-202ENST00000378034 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
CKAP2-202ENST00000378034 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 A0A1W2PQ67 120 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 METTL12A8MUP2 240 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 INSIG1O15503 277 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 PLRG1O43660 514 aaKnown RBP13.4□□□□□ -0.27
CKAP2-202ENST00000378034 EPN2O95208 641 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 RETP07949 1114 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 GKP32189 559 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 METAP1P53582 386 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 ADPRHP54922 357 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 BCL2L1Q07817 233 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 PIP5KL1Q5T9C9 394 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 AADACL2Q6P093 401 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 NEK5Q6P3R8 708 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 NCEH1Q6PIU2 408 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 OR14C36Q8NHC7 312 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 KLHL32Q96NJ5 620 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.275e-8■■■□□ 18.2
CKAP2-202ENST00000378034 FERMT1Q9BQL6 677 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 PREBQ9HCU5 417 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 GMEB2Q9UKD1 530 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 ATP8A1Q9Y2Q0 1164 aa13.4□□□□□ -0.27
CKAP2-202ENST00000378034 TSPAN11A1L157 253 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 C16orf96A6NNT2 1141 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 KCNK3O14649 394 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 AP1G1O43747 822 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 SOCS5O75159 536 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 JCHAINP01591 159 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 ADRB3P13945 408 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 DHPSP49366 369 aaPredicted RBP13.39□□□□□ -0.27
CKAP2-202ENST00000378034 OTUD4Q01804 1114 aaKnown RBP13.39□□□□□ -0.27
CKAP2-202ENST00000378034 KLF1Q13351 362 aaPredicted RBP13.39□□□□□ -0.27
CKAP2-202ENST00000378034 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 SLC45A4Q5BKX6 768 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 WDR45BQ5MNZ6 344 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 BRAT1Q6PJG6 821 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 ACTL9Q8TC94 416 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 HAUS1Q96CS2 278 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 FAM122AQ96E09 287 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 VAT1Q99536 393 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 FRMD8P1Q9BZ68 369 aaPredicted RBP13.39□□□□□ -0.27
CKAP2-202ENST00000378034 KCND1Q9NSA2 647 aa13.39□□□□□ -0.27
CKAP2-202ENST00000378034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
CKAP2-202ENST00000378034 TNRC6BQ9UPQ9 1833 aaKnown RBP13.39□□□□□ -0.27
CKAP2-202ENST00000378034 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 KCNK1O00180 336 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 RNF103O00237 685 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 LRP3O75074 770 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 HOXD12P35452 270 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 CCR5P51681 352 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ITKQ08881 620 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 LPAL2Q16609 132 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ZNF569Q5MCW4 686 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 CFAP58Q5T655 872 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 PARS2Q7L3T8 475 aaKnown RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ZC3H18Q86VM9 953 aaKnown RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 SLC41A1Q8IVJ1 513 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 CDKL3Q8IVW4 592 aaPredicted RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ABCA7Q8IZY2 2146 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms