RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 ELP3Q9H9T3 547 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 TMX2-CTNND1H3BSU7 103 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 GNAO1P09471 354 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 ARNTP27540 789 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 TAS2R39P59534 338 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 RAB10P61026 200 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 RHDQ02161 417 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 LPCAT2Q7L5N7 544 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 CATSPER4Q7RTX7 472 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 GPRIN1Q7Z2K8 1008 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 CPNE9Q8IYJ1 553 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 SIX6OS1Q8N1H7 587 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 DIS3LQ8TF46 1054 aaKnown RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 EDEM1Q92611 657 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 LRCH3Q96II8 777 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 ELMO2Q96JJ3 720 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 MAELQ96JY0 434 aaKnown RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 C16orf70Q9BSU1 422 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 SPON1Q9HCB6 807 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 STAP1Q9ULZ2 295 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 ZNF839A8K0R7 811 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 SLCO1B7G3V0H7 640 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 PIRO00625 290 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 SOCS2O14508 198 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 ZNF23P17027 643 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 UGT1A6P19224 532 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 ADSLP30566 484 aaPredicted RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 TXNL4AP83876 142 aaKnown RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 DCTN2Q13561 401 aaKnown RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 FASTKQ14296 549 aaKnown RBP18.19■□□□□ 0.5
GNE-201ENST00000377902 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 BORAQ6PGQ7 559 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 OSMRQ99650 979 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 ULBP1Q9BZM6 244 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 PLEKHA5Q9HAU0 1116 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 TIMMDC1Q9NPL8 285 aa18.19■□□□□ 0.5
GNE-201ENST00000377902 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 MAGEB16A2A368 324 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 H3BNH8 94 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 H3BRB1 525 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 TRIM24O15164 1050 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 C8BP07358 591 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 NCAM1P13591 858 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 STMN1P16949 149 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 YWHAQP27348 245 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 ETFBP38117 255 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 CDH17Q12864 832 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 SEMA3BQ13214 749 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 CSHL1Q14406 222 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 ZNF789Q5FWF6 425 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 IPMKQ8NFU5 416 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 ITFG2Q969R8 447 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 PHF21BQ96EK2 531 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 TEKT5Q96M29 485 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 TUT1Q9H6E5 874 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 FBRSL1Q9HCM7 1045 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 DDIT4Q9NX09 232 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 CNOT6Q9ULM6 557 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 MTF2Q9Y483 593 aaPredicted RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 SBF1O95248 1867 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
GNE-201ENST00000377902 NPR3P17342 541 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 ADCYAP1R1P41586 468 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 SLC1A2P43004 574 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 NME5P56597 212 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 YBX1P67809 324 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 FRG1Q14331 258 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 GRIK4Q16099 956 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 C6orf10Q5SRN2 563 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 SLC27A1Q6PCB7 646 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 KLHL35Q6PF15 583 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 MAMDC4Q6UXC1 1216 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 ALKAL1Q6UXT8 129 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 MOB2Q70IA6 237 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 ARMCX2Q7L311 632 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 FAM47BQ8NA70 645 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 MED10Q9BTT4 135 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 KIFC1Q9BW19 673 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 UNC93B1Q9H1C4 597 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 TMEM30AQ9NV96 361 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 DUS2Q9NX74 493 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 SUCOQ9UBS9 1254 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 EBF1Q9UH73 591 aa18.18■□□□□ 0.5
GNE-201ENST00000377902 CNOT11Q9UKZ1 510 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 TDRKHQ9Y2W6 561 aaKnown RBP18.18■□□□□ 0.5
GNE-201ENST00000377902 FAM149AA5PLN7 773 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 PSMD12O00232 456 aaPredicted RBP18.17■□□□□ 0.5
GNE-201ENST00000377902 HTRA2O43464 458 aaPredicted RBP18.17■□□□□ 0.5
GNE-201ENST00000377902 USP17L7P0C7H9 530 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
GNE-201ENST00000377902 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
GNE-201ENST00000377902 CTBSQ01459 385 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 RBM20Q5T481 1227 aaKnown RBP18.17■□□□□ 0.5
GNE-201ENST00000377902 CLEC6AQ6EIG7 209 aa18.17■□□□□ 0.5
GNE-201ENST00000377902 SLC2A13Q96QE2 648 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms