RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TRIM43BA6NCK2 446 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 GOLGA8TH3BQL2 631 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 FOXD2O60548 495 aaPredicted RBP17.36■□□□□ 0.37
TRIM27-201ENST00000377194 ZNF623O75123 536 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 TNFAIP8O95379 198 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 CD1EP15812 388 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 CD97P48960 835 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 IDH3AP50213 366 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 RPL26P61254 145 aaKnown RBP17.36■□□□□ 0.37
TRIM27-201ENST00000377194 DLG2Q15700 870 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 PDPK2PQ6A1A2 396 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 FSTL4Q6MZW2 842 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 STRA8Q7Z7C7 330 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 PQLC1Q8N2U9 271 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■■■■ 95.3
TRIM27-201ENST00000377194 ACVR1CQ8NER5 493 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 TEKT5Q96M29 485 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 CPNE1Q99829 537 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 SNX15Q9NRS6 342 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 RRN3Q9NYV6 651 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 NEU3Q9UQ49 428 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 CCDC78A2IDD5 438 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 MX2P20592 715 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 NAA20P61599 178 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 NAB1Q13506 487 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ANKDD1AQ495B1 522 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 DCLRE1AQ6PJP8 1040 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 PHTF2Q8N3S3 785 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 SMYD1Q8NB12 490 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 USP33Q8TEY7 942 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ADAM2Q99965 735 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 CAB39LQ9H9S4 337 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 A0A0U1RQF3 1178 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ASGR1P07306 291 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ENTPD1P49961 510 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 MRPS22P82650 360 aaKnown RBP17.35■□□□□ 0.37
TRIM27-201ENST00000377194 EIF4EBP2Q13542 120 aaPredicted RBP17.35■□□□□ 0.37
TRIM27-201ENST00000377194 C16orf72Q14CZ0 275 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 RWDD4Q6NW29 188 aaKnown RBP17.35■□□□□ 0.37
TRIM27-201ENST00000377194 SAPCD2Q86UD0 394 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ZNF512Q96ME7 567 aaPredicted RBP17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 RBBP8Q99708 897 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 Q9H521 79 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 NMRK2Q9NPI5 230 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 NUDT5Q9UKK9 219 aa17.35■□□□□ 0.37
TRIM27-201ENST00000377194 CYP11A1P05108 521 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 GRTP1Q5TC63 336 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 SPATA22Q8NHS9 363 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 GRIN3AQ8TCU5 1115 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 ATP2A3Q93084 1043 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 CMTM5Q96DZ9 223 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 COPS7BQ9H9Q2 264 aaPredicted RBP17.34■□□□□ 0.37
TRIM27-201ENST00000377194 FAIMQ9NVQ4 179 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 SFMBT1Q9UHJ3 866 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 TRHDEQ9UKU6 1024 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 IGLV3-25P01717 112 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 PGGT1BP53609 377 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 BTG3Q14201 252 aaPredicted RBP17.34■□□□□ 0.37
TRIM27-201ENST00000377194 DSC3Q14574 896 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 PATL1Q86TB9 770 aaKnown RBP17.34■□□□□ 0.37
TRIM27-201ENST00000377194 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 SLX1AQ9BQ83 275 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 BRD8Q9H0E9 1235 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 NDFIP2Q9NV92 336 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 COPG2Q9UBF2 871 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 M0QZQ0 153 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 MSI1O43347 362 aaKnown RBP17.34■□□□□ 0.37
TRIM27-201ENST00000377194 B4GALT3O60512 393 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 ADAMTS4O75173 837 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 FAM58BPP0C7Q3 252 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 COL6A2P12110 1019 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 NMBRP28336 390 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 MTTPP55157 894 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 OVOS1Q6IE37 1185 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 RGMBQ6NW40 437 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 LRGUKQ96M69 825 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 SORT1Q99523 831 aa17.34■□□□□ 0.37
TRIM27-201ENST00000377194 OXCT2Q9BYC2 517 aaPredicted RBP17.34■□□□□ 0.37
TRIM27-201ENST00000377194 DFFAO00273 331 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 MTSS1O43312 755 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 DCXO43602 365 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 MAGEA12P43365 314 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 LIMK2P53671 638 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 IRF9Q00978 393 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 APOFQ13790 326 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 KCNA10Q16322 511 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 METTL23Q86XA0 190 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 AHI1Q8N157 1196 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 GIPC3Q8TF64 312 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 PPP1R14BQ96C90 147 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 UPF3AQ9H1J1 476 aaKnown RBP17.33■□□□□ 0.36
TRIM27-201ENST00000377194 ZNF696Q9H7X3 374 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 PSMD13Q9UNM6 376 aa17.33■□□□□ 0.36
TRIM27-201ENST00000377194 ERI2A8K979 691 aaKnown RBP17.33■□□□□ 0.36
TRIM27-201ENST00000377194 E9PBE3 544 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms