RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 NCKIPSDQ9NZQ3 722 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 ZNF195O14628 629 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 DNAJA2O60884 412 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 OR6B1O95007 311 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 SCNN1AP37088 669 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 PPARGP37231 505 aaPredicted RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 SLC5A3P53794 718 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 IRX1P78414 480 aaPredicted RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 MRPS6P82932 125 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 LBRQ14739 615 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 C6orf52Q5T4I8 152 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 MAP3K21Q5TCX8 1036 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 ZYG11AQ6WRX3 759 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 AMIGO2Q86SJ2 522 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 THEM5Q8N1Q8 247 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 KCTD13Q8WZ19 329 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 C1orf21Q9H246 121 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 PIF1Q9H611 641 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 PDP2Q9P2J9 529 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 SNX13Q9Y5W8 968 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 RBM47A0AV96 593 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 J3KR12 359 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 MATN2O00339 956 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 CPB1P15086 417 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 CSE1LP55060 971 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 DSC2Q02487 901 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 KLC3Q6P597 504 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 AGMOQ6ZNB7 445 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 PIM3Q86V86 326 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 CENPLQ8N0S6 344 aaPredicted RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 TXNDC5Q8NBS9 432 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 SYT17Q9BSW7 474 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 AURKCQ9UQB9 309 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 CABYRO75952 493 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 PLIN5Q00G26 463 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 MS4A2Q01362 244 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 NSUN2Q08J23 767 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP11-204ENST00000377107 FAM110CQ1W6H9 321 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 CYS1Q717R9 158 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 SATL1Q86VE3 508 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 PQLC1Q8N2U9 271 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 OR10T2Q8NGX3 314 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 GATA6Q92908 595 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 HDAC10Q969S8 669 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 SLC45A3Q96JT2 553 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 EXOC2Q96KP1 924 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 RTKNQ9BST9 563 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 TRIM8Q9BZR9 551 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 NACA2Q9H009 215 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 MRPL46Q9H2W6 279 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 CATSPERBQ9H7T0 1116 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 FBRSL1Q9HCM7 1045 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 SARS2Q9NP81 518 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 COPG1Q9Y678 874 aaKnown RBP13.06□□□□□ -0.32
USP11-204ENST00000377107 PTPRFP10586 1907 aa13.06□□□□□ -0.32
USP11-204ENST00000377107 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 MBLAC1A4D2B0 266 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 GJB3O75712 270 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 STAMBPO95630 424 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 MYL4P12829 197 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 KCNA5P22460 613 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GEMP55040 296 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GK3PQ14409 553 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 PSMD5Q16401 504 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GPR158Q5T848 1215 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GDF6Q6KF10 455 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 DCLRE1AQ6PJP8 1040 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 SCIMPQ6UWF3 145 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GTF3C2Q8WUA4 911 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 NT5C3BQ969T7 300 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 PRPF18Q99633 342 aaKnown RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 GPR22Q99680 433 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 DRC3Q9H069 523 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 ERI2A8K979 691 aaKnown RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 GABRDO14764 452 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 CCNT2O60583 730 aaKnown RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 SEC24DO94855 1032 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 UQCRBP14927 111 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 ME2P23368 584 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 YWHAQP27348 245 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 PAOXQ6QHF9 649 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 DCBLD1Q8N8Z6 715 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 ATP6V1E2Q96A05 226 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 NTAN1Q96AB6 310 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 RPRD1AQ96P16 312 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms