RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CRYBG2Q8N1P7 616 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 TOP6BLQ8N6T0 577 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 ZNF483Q8TF39 744 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 DNAJC1Q96KC8 554 aaKnown RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 LENG8Q96PV6 779 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 EBF2Q9HAK2 575 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 MID1IP1Q9NPA3 183 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 MOSPD1Q9UJG1 213 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 FBXW11Q9UKB1 542 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 RREB1Q92766 1687 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 A0A0D9SEW6 157 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 TCRBV5S1A1TA0A578 114 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 DUSP11O75319 330 aaKnown RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 RAG1P15918 1043 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 GLDCP23378 1020 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 PBLDP30039 288 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 MOGSQ13724 837 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 TMTC4Q5T4D3 741 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 DRICH1Q6PGQ1 229 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 AMIGO2Q86SJ2 522 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 ST13P4Q8IZP2 240 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 ZNF366Q8N895 744 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 OR9I1Q8NGQ6 314 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 CLIC5Q9NZA1 410 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 COPG2Q9UBF2 871 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 SNX13Q9Y5W8 968 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 RNF103-CHMP3A0A140T963 221 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 AKAP10O43572 662 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 RHOCP08134 193 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 XPAP23025 273 aaPredicted RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 GEMP55040 296 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 LAMB3Q13751 1172 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 BLMHQ13867 455 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 MAP7Q14244 749 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ATXN7L2Q5T6C5 722 aaPredicted RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 ANO7Q6IWH7 933 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 FSTL5Q8N475 847 aaPredicted RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 TRPV1Q8NER1 839 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 PPP1R10Q96QC0 940 aaKnown RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 NPY6RQ99463 290 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 MIPEPQ99797 713 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 GPR62Q9BZJ7 368 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 GLOD4Q9HC38 313 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ZDHHC4Q9NPG8 344 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ZNHIT2Q9UHR6 403 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 PCDHB9Q9Y5E1 797 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 SCAMP1O15126 338 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 LMNAP02545 664 aaKnown RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 AHSGP02765 367 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 AXLP30530 894 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ZNF177Q13360 481 aaPredicted RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 SLC9A4Q6AI14 798 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ULK2Q8IYT8 1036 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 AAR2Q9Y312 384 aaKnown RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 MYOCOSA0A1B0GUC4 107 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 SAC3D1A6NKF1 404 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 GCATO75600 419 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 LINC00032P0C843 101 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 SLC1A2P43004 574 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 PTRHD1Q6GMV3 140 aaKnown RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 LRRC8BQ6P9F7 803 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 SEPHS2Q99611 448 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 TNKS2Q9H2K2 1166 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 CERS4Q9HA82 394 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 FBRSL1Q9HCM7 1045 aaKnown RBP11.79□□□□□ -0.52
DDR1-227ENST00000376570 ABCC13Q9NSE7 274 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 ARHGAP26Q9UNA1 814 aa11.79□□□□□ -0.52
DDR1-227ENST00000376570 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 BTN3A1O00481 513 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 TIMM44O43615 452 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SIN3BO75182 1162 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 PSMG1O95456 288 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 EEF1B2P24534 225 aaKnown RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 ALDH1A3P47895 512 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 OXCT1P55809 520 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 RIPK1Q13546 671 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 LPIN1Q14693 890 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 FAM187BQ17R55 369 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 DENND1AQ8TEH3 1009 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 GFM2Q969S9 779 aaKnown RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 CPNE1Q99829 537 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 FRMD8P1Q9BZ68 369 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 TBC1D13Q9NVG8 400 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SCHIP1Q9P0W5 487 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 CORO1CQ9ULV4 474 aaPredicted RBP11.78□□□□□ -0.52
DDR1-227ENST00000376570 RNF112Q9ULX5 631 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 ACTL7BQ9Y614 415 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
DDR1-227ENST00000376570 SNAP91O60641 907 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms