RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	TDRKH	Q9Y2W6	561 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	SKAP2	O75563	359 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	PTPN7	P35236	360 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	GPNMB	Q14956	572 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	NEPRO	Q6NW34	567 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	CNST	Q6PJW8	725 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	LVRN	Q6Q4G3	990 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	SPNS2	Q8IVW8	549 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	DDIAS	Q8IXT1	998 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	TDH	Q8IZJ6	230 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	OR13C4	Q8NGS5	318 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	CLPB	Q9H078	707 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	NOD2	Q9HC29	1040 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	GPAM	Q9HCL2	828 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	PRKAB1	Q9Y478	270 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	CFLAR	O15519	480 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	RIPK2	O43353	540 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	NFATC1	O95644	943 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	PPARG	P37231	505 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	STAT4	Q14765	748 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	FSCB	Q5H9T9	825 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	OR52K2	Q8NGK3	314 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	ZSWIM3	Q96MP5	696 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	ARL5A	Q9Y689	179 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	CTIF	O43310	598 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ARHGEF15	O94989	841 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	CD70	P32970	193 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	SPR	P35270	261 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	NME5	P56597	212 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ASPH	Q12797	758 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ZNF460	Q14592	562 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	HIPK4	Q8NE63	616 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ESAM	Q96AP7	390 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	BRD8	Q9H0E9	1235 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ANLN	Q9NQW6	1124 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	WHRN	Q9P202	907 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	BTNL10	A8MVZ5	291 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	SNRPA	P09012	282 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	TROVE2	P10155	538 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	FECH	P22830	423 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	GEMIN4	P57678	1058 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	BTK	Q06187	659 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	SETMAR	Q53H47	684 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	DUPD1	Q68J44	220 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	DPY19L2P1	Q6NXN4	242 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	DENND6A	Q8IWF6	608 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	DEFB123	Q8N688	67 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	C12orf50	Q8NA57	414 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	DNAJC1	Q96KC8	554 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	SUPT7L	O94864	414 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	LUC7L3	O95232	432 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	STAU1	O95793	577 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	KLKB1	P03952	638 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	CYP11A1	P05108	521 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	FYN	P06241	537 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ADH5	P11766	374 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	CTSO	P43234	321 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	PPP2R2A	P63151	447 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	PTK6	Q13882	451 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	MRNIP	Q6NTE8	343 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	TRIM74	Q86UV6	250 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	TEKT4	Q8WW24	435 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	AGAP2	Q99490	1192 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	ATP13A3	Q9H7F0	1226 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	TBC1D14	Q9P2M4	693 aa		13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	HBS1L	Q9Y450	684 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-225	ENST00000376568	KATNA1	O75449	491 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	AARS	P49588	968 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	GTF2H3	Q13889	308 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	PTPRN	Q16849	979 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	AAK1	Q2M2I8	961 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	SLC8B1	Q6J4K2	584 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	OTOA	Q7RTW8	1153 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	PHACTR4	Q8IZ21	702 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	RAB3IL1	Q8TBN0	382 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	SCG3	Q8WXD2	468 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	CLIC5	Q9NZA1	410 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	ZNHIT2	Q9UHR6	403 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	COQ6	Q9Y2Z9	468 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	BACE2	Q9Y5Z0	518 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568		A0A1W2PPM1	405 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	CRTAM	O95727	393 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	APOD	P05090	189 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	ITGAV	P06756	1048 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	CREB1	P16220	341 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	ITGAL	P20701	1170 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	NMBR	P28336	390 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	LIG3	P49916	1009 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	DGKE	P52429	567 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	ATXN3	P54252	364 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	OCRL	Q01968	901 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	MICALCL	Q6ZW33	695 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	SHKBP1	Q8TBC3	707 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	PRKD2	Q9BZL6	878 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	CRISPLD2	Q9H0B8	497 aa		13.67	□□□□□ -0.22
DDR1-225	ENST00000376568	KLHL14	Q9P2G3	628 aa		13.67	□□□□□ -0.22

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