RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ANXA5P08758 320 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CHKAP35790 457 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 STXBP5Q5T5C0 1151 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 FAM151BQ6UXP7 276 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ETNPPLQ8TBG4 499 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 EEF1AKMT1Q8WVE0 214 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ABCC13Q9NSE7 274 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 TRMT13Q9NUP7 481 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 STARD13Q9Y3M8 1113 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 OR10H3O60404 316 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 SLC26A2P50443 739 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ELAVL2Q12926 359 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 MOXD1Q6UVY6 613 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 TAF8Q7Z7C8 310 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 PSTKQ8IV42 348 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CFAP52Q8N1V2 620 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 VANGL1Q8TAA9 524 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 SLC25A23Q9BV35 468 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 GNPTGQ9UJJ9 305 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 OPLAHO14841 1288 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 POLR2LP62875 67 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 TTMPQ5BVD1 217 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ADHFE1Q8IWW8 467 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 DAW1Q8N136 415 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ATP6V1C2Q8NEY4 427 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 PAPSS1O43252 624 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 RAB27AP51159 221 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ITGA1P56199 1179 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 PUDPQ08623 228 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ZNF697Q5TEC3 545 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 SERPINA13PQ6UXR4 307 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 RBM43Q6ZSC3 357 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 KRT74Q7RTS7 529 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ELOA2Q8IYF1 753 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 C12orf29Q8N999 325 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 TFEBP19484 476 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CDC42P60953 191 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 ADGRG2Q8IZP9 1017 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 OR4A15Q8NGL6 344 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CLN6Q9NWW5 311 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CDH9Q9ULB4 789 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 SNX6Q9UNH7 406 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 GSTK1Q9Y2Q3 226 aa13.82□□□□□ -0.2
COL4A1-201ENST00000375820 GPC6Q9Y625 555 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-201ENST00000375820 CD3EAPO15446 510 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 ZW10O43264 779 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 VPS4BO75351 444 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 SASH3O75995 380 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 GOT1P17174 413 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 LGALS3BPQ08380 585 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 TET3O43151 1660 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 FAM92AA1XBS5 289 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 GUCY1B2O75343 617 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 CST1P01037 141 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 LGALS2P05162 132 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 AKR1A1P14550 325 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 FOSL2P15408 326 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 AQP1P29972 269 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 TLX1P31314 330 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 PSMD4P55036 377 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 GALNT5Q7Z7M9 940 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 FAM98AQ8NCA5 519 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 STK32AQ8WU08 396 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 DUSP9Q99956 384 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 UXTQ9UBK9 157 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 SALL1Q9NSC2 1324 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 CCNB1P14635 433 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 ETS2P15036 469 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 NR1D2Q14995 579 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 PARP6Q2NL67 630 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 ZDHHC17Q8IUH5 632 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 POC5Q8NA72 575 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 TNFSF13BQ9Y275 285 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 C2orf71A6NGG8 1288 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 AREL1O15033 823 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 SCGNO76038 276 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 CCNYL3P0C7X3 344 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 HDCP19113 662 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 RERGQ96A58 199 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 TRNT1Q96Q11 434 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 TBCBQ99426 244 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 RIOX1Q9H6W3 641 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 BTBD3Q9Y2F9 522 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 CNTNAP4Q9C0A0 1308 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 RBMXL2O75526 392 aaKnown RBP13.81□□□□□ -0.2
COL4A1-201ENST00000375820 EPHA3P29320 983 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 PPIL2Q13356 520 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 PTPN20Q4JDL3 420 aa13.81□□□□□ -0.2
COL4A1-201ENST00000375820 SLC45A4Q5BKX6 768 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms