RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CD160O95971 181 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 TDGF1P13385 188 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 CD68P34810 354 aaPredicted RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 GRIA2P42262 883 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 STK19P49842 368 aaPredicted RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 TERF1P54274 439 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 RHOAP61586 193 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 CALCOCO2Q13137 446 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 PRPSAP1Q14558 356 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 CYTH1Q15438 398 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 LPAL2Q16609 132 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 PPM1JQ5JR12 505 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 MAMSTRQ6ZN01 415 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 SEC14L1Q92503 715 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 MSANTD3Q96H12 275 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 RPL10LQ96L21 214 aaKnown RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 PPP1R2P1Q96PQ5 205 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 MGME1Q9BQP7 344 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 GDF3Q9NR23 364 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 WHRNQ9P202 907 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 NDRG2Q9UN36 371 aaKnown RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 ERVW-1Q9UQF0 538 aa17.76■□□□□ 0.43
PFDN6-201ENST00000374606 FCF1Q9Y324 198 aaKnown RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 MUC22E2RYF6 1773 aaPredicted RBP17.76■□□□□ 0.43
PFDN6-201ENST00000374606 CACNA1GO43497 2377 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 GOLGA6CA6NDK9 693 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 GOLGA6BA6NDN3 693 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SHISA7A6NL88 538 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 PRRT4C9JH25 899 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 BHMG1C9JSJ3 638 aaPredicted RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 METTL18O95568 372 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 MT-CO1P00395 513 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 RETP07949 1114 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SRPRAP08240 638 aaKnown RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 DLDP09622 509 aaKnown RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 GOLGA6DP0CG33 693 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SRCP12931 536 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 MCM3P25205 808 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 IVDP26440 423 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 NNMTP40261 264 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 DRG2P55039 364 aaKnown RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 MAXP61244 160 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 MESP2Q0VG99 397 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SEMA5AQ13591 1074 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 CUL1Q13616 776 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 NAA30Q147X3 362 aaPredicted RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 C22orf39Q6P5X5 142 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 PRR23BQ6ZRT6 265 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 PCGF5Q86SE9 256 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 PGBD5Q8N414 524 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SH2D3CQ8N5H7 860 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 TSEN2Q8NCE0 465 aaKnown RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 CYB5D2Q8WUJ1 264 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 UCMAQ8WVF2 138 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SORCS1Q8WY21 1168 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 EXOC2Q96KP1 924 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 ETNK1Q9HBU6 452 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 ELOVL2Q9NXB9 296 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 GOLGA6AQ9NYA3 693 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 GRHL1Q9NZI5 618 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 LHX3Q9UBR4 397 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 TPX2Q9ULW0 747 aaKnown RBP17.75■□□□□ 0.43
PFDN6-201ENST00000374606 SLC8A2Q9UPR5 921 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 USP24Q9UPU5 2620 aa17.75■□□□□ 0.43
PFDN6-201ENST00000374606 ZFHX4Q86UP3 3567 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.74■□□□□ 0.43
PFDN6-201ENST00000374606 K7ERQ8 282 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 MUSKO15146 869 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 TIMM44O43615 452 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 ITIH2P19823 946 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 LMAN1P49257 510 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 CCR3P51677 355 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 ST8SIA6P61647 398 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 DSC2Q02487 901 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.434e-6■■■□□ 18.1
PFDN6-201ENST00000374606 ALG1LQ6GMV1 187 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 PPIL6Q8IXY8 311 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 ZNF687Q8N1G0 1237 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 IFT81Q8WYA0 676 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 FCRL5Q96RD9 977 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 FAM129AQ9BZQ8 928 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 CEP44Q9C0F1 390 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 SLC25A51Q9H1U9 297 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 SHOC2Q9UQ13 582 aa17.74■□□□□ 0.43
PFDN6-201ENST00000374606 UQCRHLA0A096LP55 91 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 SMAD6O43541 496 aaKnown RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 ANXA9O76027 345 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 IGSF6O95976 241 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 TUBBP07437 444 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 APRTP07741 180 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 UQCRHP07919 91 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 TNFRSF8P28908 595 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 VASPP50552 380 aaPredicted RBP17.73■□□□□ 0.43
PFDN6-201ENST00000374606 GALK1P51570 392 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 ITGA8P53708 1063 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 GEMP55040 296 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 CAV1Q03135 178 aa17.73■□□□□ 0.43
PFDN6-201ENST00000374606 KCNJ11Q14654 390 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms