RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 MAGP20916 626 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ME2P23368 584 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TNFAIP8L3Q5GJ75 292 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 SAMD4BQ5PRF9 694 aaKnown RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 ZPBP2Q6X784 338 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 RNF180Q86T96 592 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 HIPK1Q86Z02 1210 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TIGD4Q8IY51 512 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 NT5C1AQ9BXI3 368 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 THAP2Q9H0W7 228 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TCF7L2Q9NQB0 619 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 FAM49BQ9NUQ9 324 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 POLG2Q9UHN1 485 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 THEGLP0DJG4 465 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 RARAP10276 462 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 COMTP21964 271 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 THOP1P52888 689 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 FAM110CQ1W6H9 321 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ACAD10Q6JQN1 1059 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 GALNT7Q86SF2 657 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 PPIL6Q8IXY8 311 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 MYO1HQ8N1T3 1032 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 CENPSQ8N2Z9 138 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 PGBD4Q96DM1 585 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 MFSD14AQ96MC6 490 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TUBA1CQ9BQE3 449 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TLR10Q9BXR5 811 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 HPS4Q9NQG7 708 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 SHOC2Q9UQ13 582 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 SLC45A1Q9Y2W3 748 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ACTL7BQ9Y614 415 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TGFB1I1O43294 461 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 SNX3O60493 162 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 SDC4P31431 198 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 MAPK12P53778 367 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 PKNOX1P55347 436 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 OXCT1P55809 520 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ILF2Q12905 390 aaKnown RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 DNASE1L3Q13609 305 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 PPM1LQ5SGD2 360 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 PDPK2PQ6A1A2 396 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TIGD7Q6NT04 549 aaPredicted RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 SV2AQ7L0J3 742 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TMEM139Q8IV31 216 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 EBF3Q9H4W6 596 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 SLC9A8Q9Y2E8 581 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 NCANO14594 1321 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 CAPN8A6NHC0 703 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 HAT1O14929 419 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 MDM4O15151 490 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 GZMAP12544 262 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 NR4A1P22736 598 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 TCEA1P23193 301 aaKnown RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 PEX2P28328 305 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ARL2P36404 184 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 MMP13P45452 471 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 ANKRD26P1Q6NSI1 321 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 CENPLQ8N0S6 344 aaPredicted RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 MSANTD3Q96H12 275 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 IKZF4Q9H2S9 585 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 DENND2DQ9H6A0 471 aaPredicted RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 PTBP2Q9UKA9 531 aaKnown RBP6.65□□□□□ -1.35
CHD6-203ENST00000373233 ITGA11Q9UKX5 1188 aa6.65□□□□□ -1.35
CHD6-203ENST00000373233 MMP3P08254 477 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ENDOUP21128 410 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 UGP2Q16851 508 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 AP3S1Q92572 193 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ACO2Q99798 780 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 ADPRHL2Q9NX46 363 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 KLK14Q9P0G3 267 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 LACTBL1A8MY62 500 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PSMD12O00232 456 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 PROCP04070 461 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 RPLP2P05387 115 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 GTF2H3Q13889 308 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 STILQ15468 1287 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 WDR59Q6PJI9 974 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PLET1Q6UQ28 207 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 GALNT12Q8IXK2 581 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 VANGL1Q8TAA9 524 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 ZNF398Q8TD17 642 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 GFM1Q96RP9 751 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 THAP1Q9NVV9 213 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 POLIQ9UNA4 740 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 ERCC2P18074 760 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 MAZP56270 477 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 SCN1BQ07699 218 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 HERC3Q15034 1050 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 FAM47BQ8NA70 645 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 HDAC7Q8WUI4 952 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 BTN2A2Q8WVV5 523 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 CORO1BQ9BR76 489 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 WRAP73Q9P2S5 460 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 DUSP12Q9UNI6 340 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 PHF24Q9UPV7 400 aa6.64□□□□□ -1.35
CHD6-203ENST00000373233 FNDC3AQ9Y2H6 1198 aaKnown RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 MAFBQ9Y5Q3 323 aaPredicted RBP6.64□□□□□ -1.35
CHD6-203ENST00000373233 KIAA0100Q14667 2235 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms