RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CLOCKO15516 846 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 AOC2O75106 756 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ME2P23368 584 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 S100A12P80511 92 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CBX3Q13185 183 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 HYIQ5T013 277 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 KHDRBS2Q5VWX1 349 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 C19orf18Q8NEA5 215 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 C1QTNF3-AMACRE9PGA6 284 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 RPN2P04844 631 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 PGAM1P18669 254 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 HALP42357 657 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ANXA11P50995 505 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CSHL1Q14406 222 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ECM1Q16610 540 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 MFSD7Q6UXD7 560 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZCCHC9Q8N567 271 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 GRIN3AQ8TCU5 1115 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 AGAP11Q8TF27 550 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 KAT5Q92993 513 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 OXCT2Q9BYC2 517 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZYG11BQ9C0D3 744 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 KLHL3Q9UH77 587 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 A0A087WXM4 84 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CBFA2T3O75081 653 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 STAU1O95793 577 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 PSMB9P28065 219 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF143P52747 638 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 NET1Q7Z628 596 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 BRI3BPQ8WY22 251 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 NLNQ9BYT8 704 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 RAD18Q9NS91 495 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 EVA1BQ9NVM1 165 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ANKRD6Q9Y2G4 727 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 TDRKHQ9Y2W6 561 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM20BO75063 409 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CD151P48509 253 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 NAB1Q13506 487 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 SPANXN3Q5MJ09 141 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 SERPINA13PQ6UXR4 307 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 DLG3Q92796 817 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 RPRD1BQ9NQG5 326 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 RAB23Q9ULC3 237 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CLDN5O00501 218 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 SNX3O60493 162 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 CLTBP09497 229 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 RPS2P15880 293 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 GABRR2P28476 465 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 THOP1P52888 689 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 ARSHQ5FYA8 562 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 EPS8L1Q8TE68 723 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 MED8Q96G25 268 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 MRPL45Q9BRJ2 306 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 C9orf16Q9BUW7 83 aa13.44□□□□□ -0.26
RAPGEF1-201ENST00000372189 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 A8MX80 341 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 KCNK1O00180 336 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 SCAMP3O14828 347 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 KLRC4O43908 158 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 IFNA14P01570 189 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 TPBGLP0DKB5 382 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 GP5P40197 560 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 DGUOKQ16854 277 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ARMC4Q5T2S8 1044 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZYG11AQ6WRX3 759 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 RIPOR1Q6ZS17 1223 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 TMEM26Q6ZUK4 368 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM35AQ86V20 835 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CCDC74AQ96AQ1 378 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 TUBA1CQ9BQE3 449 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CHID1Q9BWS9 393 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 DUSP16Q9BY84 665 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 RBPJLQ9UBG7 517 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF879B4DU55 563 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 LGR5O75473 907 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF682O95780 498 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ADH1CP00326 375 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CTSEP14091 401 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CDK7P50613 346 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAMLD1Q13495 774 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CYP4Z1Q86W10 505 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 LRRC20Q8TCA0 184 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ASB12Q8WXK4 309 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 TELO2Q9Y4R8 837 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 PCDHGC5Q9Y5F6 944 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM208AQ9UK61 1670 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 PLIN4Q96Q06 1357 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 RPTORQ8N122 1335 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CCDC182A6NF36 153 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms