RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 IRF1P10914 325 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 GRIA2P42262 883 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 MGAT3Q09327 533 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 NIPAL4Q0D2K0 466 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 TAF10Q12962 218 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 TMED1Q13445 227 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 ZNF235Q14590 738 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 DEFB128Q7Z7B8 93 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 SPATA24Q86W54 205 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 ATP6V0D2Q8N8Y2 350 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 PDCD6IPQ8WUM4 868 aaKnown RBP17.27■□□□□ 0.35
VEGFA-205ENST00000372067 SLC7A6OSQ96CW6 309 aaPredicted RBP17.27■□□□□ 0.35
VEGFA-205ENST00000372067 FBXO44Q9H4M3 255 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 COPG2Q9UBF2 871 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 HS3ST4Q9Y661 456 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 DNAH12Q6ZR08 3092 aa17.27■□□□□ 0.35
VEGFA-205ENST00000372067 TMEM88BA6NKF7 163 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TBKBP1A7MCY6 615 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 BIRC5O15392 142 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 USP1O94782 785 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TGDSO95455 350 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 HLA-DQB2P05538 268 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 PIRTP0C851 137 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 LIMK2P53671 638 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 ASPHQ12797 758 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 KPNB1Q14974 876 aaKnown RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 PCID2Q5JVF3 399 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 C1orf146Q5VVC0 180 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 STEAP4Q687X5 459 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TIGD7Q6NT04 549 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 CFAP52Q8N1V2 620 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 MPP4Q96JB8 637 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 FTHL17Q9BXU8 183 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 C20orf27Q9GZN8 174 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 CASS4Q9NQ75 786 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 SLC2A6Q9UGQ3 507 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 RAD54BQ9Y620 910 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 FGF10O15520 208 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 PQBP1O60828 265 aaKnown RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 ZMPSTE24O75844 475 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 COL6A2P12110 1019 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 CYP2C18P33260 490 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 WNT3AP56704 352 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 DUSP4Q13115 394 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 NAB1Q13506 487 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TEDDM1Q5T9Z0 273 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 PDPK2PQ6A1A2 396 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 SCD5Q86SK9 330 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 BLOC1S5Q8TDH9 187 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 BHMTQ93088 406 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 CADM1Q9BY67 442 aaKnown RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 SIRPGQ9P1W8 387 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 SF3B1O75533 1304 aaKnown RBP eCLIP17.26■□□□□ 0.356e-7■■■■■ 31.1
VEGFA-205ENST00000372067 ABCE1P61221 599 aaKnown RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 RCN1Q15293 331 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 ZNF276Q8N554 614 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 LZTR1Q8N653 840 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 NAT14Q8WUY8 206 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TTC1Q99614 292 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 SIKE1Q9BRV8 207 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TIMM22Q9Y584 194 aa17.26■□□□□ 0.35
VEGFA-205ENST00000372067 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.26■□□□□ 0.35
VEGFA-205ENST00000372067 TK2O00142 265 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 B4GALT3O60512 393 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 HNRNPCL1O60812 293 aaKnown RBP17.25■□□□□ 0.35
VEGFA-205ENST00000372067 OR1E1P30953 314 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 VHLP40337 213 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 SLC44A4Q53GD3 710 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 PM20D1Q6GTS8 502 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 SH2D5Q6ZV89 423 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 NMD3Q96D46 503 aaKnown RBP17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CLPTM1LQ96KA5 538 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 KCNK13Q9HB14 408 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CSNK1G1Q9HCP0 422 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 ACOT9Q9Y305 439 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 SHROOM3Q8TF72 1996 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CFLARO15519 480 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CNTN5O94779 1100 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 SLC2A3P11169 496 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 TYMPP19971 482 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CCNCP24863 283 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 GRK2P25098 689 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 NFKBIAP25963 317 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 ZNF135P52742 658 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-205ENST00000372067 NAGLUP54802 743 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CCL23P55773 120 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 OCRLQ01968 901 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 CSHL1Q14406 222 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 UGP2Q16851 508 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 LDB1Q86U70 411 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-205ENST00000372067 PPFIBP2Q8ND30 876 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 SOX13Q9UN79 622 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 ZNF711Q9Y462 761 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 AP3B1O00203 1094 aa17.25■□□□□ 0.35
VEGFA-205ENST00000372067 C1QAP02745 245 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms