RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 TRIM16LQ309B1 348 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 PERM1Q5SV97 790 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 IL31Q6EBC2 164 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 SHCBP1Q8NEM2 672 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 OR2T34Q8NGX1 318 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 OR2T3Q8NH03 318 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 ZNF420Q8TAQ5 688 aaPredicted RBP9.77□□□□□ -0.85
LRRC40-201ENST00000370952 CXorf38Q8TB03 319 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 RPF1Q9H9Y2 349 aaKnown RBP9.77□□□□□ -0.85
LRRC40-201ENST00000370952 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 GNPTGQ9UJJ9 305 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 PTBP2Q9UKA9 531 aaKnown RBP9.77□□□□□ -0.85
LRRC40-201ENST00000370952 CROTQ9UKG9 612 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 OAZ3Q9UMX2 235 aa9.77□□□□□ -0.85
LRRC40-201ENST00000370952 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ATP6AP2A0A1C7CYW4 349 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 LACTBL1A8MY62 500 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 EI24O14681 340 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 DYNC1LI2O43237 492 aaPredicted RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 NOL3O60936 208 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ATP6AP2O75787 350 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 MT-ND1P03886 318 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 HSPA1AP0DMV8 641 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 HSPA1BP0DMV9 641 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 BMP2P12643 396 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 NCAM1P13591 858 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 CCNA2P20248 432 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 YBX1P67809 324 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 LAMTOR4Q0VGL1 99 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 TRAP1Q12931 704 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 PRPSAP1Q14558 356 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SLC36A3Q495N2 470 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 TSTD2Q5T7W7 516 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 LCLAT1Q6UWP7 414 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 MPZL3Q6UWV2 235 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ACOT1Q86TX2 421 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 NT5DC4Q86YG4 428 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 CAMK1DQ8IU85 385 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 CENPLQ8N0S6 344 aaPredicted RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 PELI3Q8N2H9 469 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 NAT16Q8N8M0 369 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 BPIFB6Q8NFQ5 453 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SPPL2BQ8TCT7 592 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 STYXQ8WUJ0 223 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 NXNL1Q96CM4 212 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 UBP1Q9NZI7 540 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 KLHL8Q9P2G9 620 aaPredicted RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 DAPK2Q9UIK4 370 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 MID2Q9UJV3 735 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ST14Q9Y5Y6 855 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 GPC6Q9Y625 555 aaPredicted RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 COL2A1P02458 1487 aaPredicted RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SPATA31C2B4DYI2 1134 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SLCO1B7G3V0H7 640 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 VWA5AO00534 786 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 TIMM44O43615 452 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 IL18RAPO95256 599 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 BCL10O95999 233 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SLC35E2BP0CK96 405 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 EEF1B2P24534 225 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 CSE1LP55060 971 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 C1QTNF8P60827 252 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SEPT6Q14141 434 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SOWAHAQ2M3V2 549 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SAMD4BQ5PRF9 694 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 C6orf183Q5T699 404 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ZNF280DQ6N043 979 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 TMEM214Q6NUQ4 689 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 ZBTB8OSQ8IWT0 167 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 TOP1MTQ969P6 601 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 PPP1R16BQ96T49 567 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 PCYT2Q99447 389 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 OSBPL2Q9H1P3 480 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 FBRSL1Q9HCM7 1045 aaKnown RBP9.76□□□□□ -0.85
LRRC40-201ENST00000370952 BFARQ9NZS9 450 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SLC27A5Q9Y2P5 690 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 SCN1AP35498 2009 aa9.76□□□□□ -0.85
LRRC40-201ENST00000370952 UBDO15205 165 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 SNAP91O60641 907 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 CNOT3O75175 753 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 GPC4O75487 556 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 SNRPB2P08579 225 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 LCP1P13796 627 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 YWHAQP27348 245 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 NMBRP28336 390 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 OXTRP30559 389 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 ARL4AP40617 200 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
LRRC40-201ENST00000370952 PSMD8P48556 350 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 EFNA5P52803 228 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 PLK1P53350 603 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 KCNC4Q03721 635 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 BFSP2Q13515 415 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 ANO4Q32M45 955 aa9.75□□□□□ -0.85
LRRC40-201ENST00000370952 HSDL1Q3SXM5 330 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms