RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MIA3Q5JRA6 1907 aa24.17■■□□□ 1.46
SNX3-203ENST00000368979 DOCK8Q8NF50 2099 aa24.17■■□□□ 1.46
SNX3-203ENST00000368979 MYOFQ9NZM1 2061 aa24.17■■□□□ 1.46
SNX3-203ENST00000368979 TLDC2A0PJX2 215 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 SMIM23A6NLE4 172 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 K7ERQ8 282 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 TPH1P17752 444 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 PRKCHP24723 683 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 CHRNA4P43681 627 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 SCNN1BP51168 640 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 RHOAP61586 193 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 PDGFRLQ15198 375 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 NAT16Q8N8M0 369 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 ST13P5Q8NFI4 369 aaPredicted RBP24.16■■□□□ 1.46
SNX3-203ENST00000368979 HS3ST2Q9Y278 367 aa24.16■■□□□ 1.46
SNX3-203ENST00000368979 PRRC2BQ5JSZ5 2229 aaKnown RBP24.16■■□□□ 1.46
SNX3-203ENST00000368979 MAGEB16A2A368 324 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SMAD6O43541 496 aaKnown RBP24.15■■□□□ 1.46
SNX3-203ENST00000368979 ATP9BO43861 1147 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 EPOP01588 193 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 ATXN1LP0C7T5 689 aaKnown RBP24.15■■□□□ 1.46
SNX3-203ENST00000368979 LAMP2P13473 410 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 IGFBP4P22692 258 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 GBP2P32456 591 aaPredicted RBP24.15■■□□□ 1.46
SNX3-203ENST00000368979 CTSOP43234 321 aaPredicted RBP24.15■■□□□ 1.46
SNX3-203ENST00000368979 CDK18Q07002 472 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 CRYMQ14894 314 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 EFTUD2Q15029 972 aaKnown RBP eCLIP24.15■■□□□ 1.46
SNX3-203ENST00000368979 SLC1A5Q15758 541 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 RALGPS1Q5JS13 557 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 CYS1Q717R9 158 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 KDELC2Q7Z4H8 507 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 TMEM135Q86UB9 458 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 ADIPOR2Q86V24 386 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 TDRPQ86YL5 185 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 RNF135Q8IUD6 432 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 MFSD6LQ8IWD5 586 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 AHI1Q8N157 1196 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SMRP1Q8NCR6 262 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 TRIB3Q96RU7 358 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 CYTH2Q99418 400 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 CENPHQ9H3R5 247 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 EBF3Q9H4W6 596 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SOX13Q9UN79 622 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 MYLKQ15746 1914 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 MYO9BQ13459 2157 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 FAM237BA0A1B0GVD1 139 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 HMGB1P1B2RPK0 211 aaPredicted RBP24.15■■□□□ 1.46
SNX3-203ENST00000368979 ALDH1A2O94788 518 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 CISD3P0C7P0 127 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SULT2A1Q06520 285 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 GAB4Q2WGN9 574 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 TNFAIP8L3Q5GJ75 292 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SPANXN3Q5MJ09 141 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 ARMC3Q5W041 872 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 NCEH1Q6PIU2 408 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 C12orf40Q86WS4 652 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 ETFBKMTQ8IXQ9 262 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 RIBC1Q8N443 379 aaPredicted RBP24.15■■□□□ 1.46
SNX3-203ENST00000368979 SLC25A41Q8N5S1 370 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 ELSPBP1Q96BH3 223 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 KIFC1Q9BW19 673 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 PLA2G2FQ9BZM2 168 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 HPS4Q9NQG7 708 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 MOCS1Q9NZB8 636 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 LGALS13Q9UHV8 139 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SLC24A2Q9UI40 661 aa24.15■■□□□ 1.46
SNX3-203ENST00000368979 SOX1O00570 391 aaPredicted RBP24.14■■□□□ 1.45
SNX3-203ENST00000368979 TRIM24O15164 1050 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 CDH16O75309 829 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 USP1O94782 785 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 POLBP06746 335 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 SRCP12931 536 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 HLA-DPA1P20036 260 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 MSLNQ13421 630 aaPredicted RBP24.14■■□□□ 1.45
SNX3-203ENST00000368979 RASA2Q15283 850 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 KBTBD12Q3ZCT8 623 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 PCID2Q5JVF3 399 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 SIRPB2Q5JXA9 342 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 KCTD16Q68DU8 428 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 TTC17Q96AE7 1141 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 IFT43Q96FT9 208 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 NECTIN4Q96NY8 510 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 DHRS4Q9BTZ2 278 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 TDRD1Q9BXT4 1180 aaKnown RBP24.14■■□□□ 1.45
SNX3-203ENST00000368979 ECT2Q9H8V3 914 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 CTNNAL1Q9UBT7 734 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 SLC25A13Q9UJS0 675 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 RPS6KL1Q9Y6S9 549 aa24.14■■□□□ 1.45
SNX3-203ENST00000368979 OTOL1A6NHN0 477 aaPredicted RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 POC1B-GALNT4F8VUJ3 575 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 RGS16O15492 202 aaPredicted RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 ZNF821O75541 412 aaPredicted RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 CSNK1DP48730 415 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 DGKGP49619 791 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 STK19P49842 368 aaPredicted RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 TMEM215Q68D42 235 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 MBLAC2Q68D91 279 aa24.13■■□□□ 1.45
SNX3-203ENST00000368979 TRMT10BQ6PF06 316 aaKnown RBP24.13■■□□□ 1.45
SNX3-203ENST00000368979 SH2D3CQ8N5H7 860 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms