RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 GPD1P21695 349 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 CCND2P30279 289 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SFNP31947 248 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 ARCN1P48444 511 aaKnown RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 TRPC1P48995 793 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 AP3M2P53677 418 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SESN2P58004 480 aaPredicted RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 IGBP1P78318 339 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 ADARB1P78563 741 aaKnown RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SPANXN3Q5MJ09 141 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 FSTL4Q6MZW2 842 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 LINC00523Q86TU6 105 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 DCP2Q8IU60 420 aaKnown RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 LRRC49Q8IUZ0 686 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 DDIASQ8IXT1 998 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 MFSD4AQ8N468 514 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 Q8N9G6 341 aaPredicted RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 MCPH1Q8NEM0 835 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 PCDH19Q8TAB3 1148 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 ZFP90Q8TF47 636 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 ADPGKQ9BRR6 497 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SLC25A23Q9BV35 468 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 MARCH7Q9H992 704 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 GMIPQ9P107 970 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 ENPP5Q9UJA9 477 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 RNF103O00237 685 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 AURKAO14965 403 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 UGT2B11O75310 529 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 C2P06681 752 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SNRPB2P08579 225 aaKnown RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 KRT6CP48668 564 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SLC7A2P52569 658 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 NAGLUP54802 743 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 MTMR1Q13613 665 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SLC12A1Q13621 1099 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 CBX2Q14781 532 aaPredicted RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 PLCL1Q15111 1095 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 AASDHQ4L235 1098 aaPredicted RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 TAS2R42Q7RTR8 314 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 PIWIL3Q7Z3Z3 882 aaKnown RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SLCO6A1Q86UG4 719 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SNX29P2Q8IUI4 249 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 LSMEM2Q8N112 164 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 LEMD2Q8NC56 503 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 PIK3C3Q8NEB9 887 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 LRRN4Q8WUT4 740 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 MOCOSQ96EN8 888 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 CEP170P1Q96L14 293 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 FUNDC2Q9BWH2 189 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 SNX25Q9H3E2 840 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 FBXO8Q9NRD0 319 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 WARS2Q9UGM6 360 aaKnown RBP18.1■□□□□ 0.49
CHTOP-201ENST00000368686 UBIAD1Q9Y5Z9 338 aa18.1■□□□□ 0.49
CHTOP-201ENST00000368686 CD19P15391 556 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 LRPAP1P30533 357 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 AGKQ53H12 422 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 STRA8Q7Z7C7 330 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 CMTR2Q8IYT2 770 aaKnown RBP18.09■□□□□ 0.49
CHTOP-201ENST00000368686 ANKK1Q8NFD2 765 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 ATXN7L3BQ96GX2 97 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 C17orf80Q9BSJ5 609 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 EIF2B3Q9NR50 452 aaKnown RBP18.09■□□□□ 0.49
CHTOP-201ENST00000368686 VWA7Q9Y334 891 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 CST3P01034 146 aaPredicted RBP18.09■□□□□ 0.49
CHTOP-201ENST00000368686 NR4A2P43354 598 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 ILF2Q12905 390 aaKnown RBP18.09■□□□□ 0.49
CHTOP-201ENST00000368686 BOLA3Q53S33 107 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 APOBEC3HQ6NTF7 200 aaKnown RBP18.09■□□□□ 0.49
CHTOP-201ENST00000368686 SLC16A12Q6ZSM3 486 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 CLIP4Q8N3C7 705 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 KDM1BQ8NB78 822 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 HMGCLL1Q8TB92 370 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 MED30Q96HR3 178 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 MYRFLQ96LU7 910 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 TSNARE1Q96NA8 513 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 MSTO1Q9BUK6 570 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 ACSS2Q9NR19 701 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHTOP-201ENST00000368686 QPCTLQ9NXS2 382 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 TESMINQ9Y4I5 508 aa18.09■□□□□ 0.49
CHTOP-201ENST00000368686 ADAMTSL1Q8N6G6 1762 aa18.08■□□□□ 0.49
CHTOP-201ENST00000368686 PTPRFP10586 1907 aa18.08■□□□□ 0.49
CHTOP-201ENST00000368686 DDTLA6NHG4 134 aaPredicted RBP18.08■□□□□ 0.48
CHTOP-201ENST00000368686 TK2O00142 265 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 DYRK3O43781 588 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 NRP2O60462 931 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 TPST1O60507 370 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 DNAJB5O75953 348 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 RPS6P62753 249 aaKnown RBP18.08■□□□□ 0.48
CHTOP-201ENST00000368686 DLG2Q15700 870 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 SMAD1Q15797 465 aaKnown RBP18.08■□□□□ 0.48
CHTOP-201ENST00000368686 RBM48Q5RL73 367 aaKnown RBP18.08■□□□□ 0.48
CHTOP-201ENST00000368686 FAM102AQ5T9C2 384 aaPredicted RBP18.08■□□□□ 0.48
CHTOP-201ENST00000368686 SH3PXD2AQ5TCZ1 1133 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 LACC1Q8IV20 430 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 IL31RAQ8NI17 732 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms