RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CBY3A6NI87 242 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 RRN3P2A6NIE6 340 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 CHL1O00533 1208 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 IKBKBO14920 756 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 NCAM2O15394 837 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 ASAP2O43150 1006 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PYGLP06737 847 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 T-ENOLP0DO92 83 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PGM1P36871 562 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 LIFRP42702 1097 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 KCNJ4P48050 445 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 BLKP51451 505 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 CLCN5P51795 746 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 NUDT6P53370 316 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZXDBP98169 803 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 EGR4Q05215 589 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 CTTNQ14247 550 aaKnown RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 NFIL3Q16649 462 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 EDRF1Q3B7T1 1238 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM95Q3KNT9 176 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PLEKHO1Q53GL0 409 aaPredicted RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 KIAA1161Q6NSJ0 714 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PATL1Q86TB9 770 aaKnown RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 SPATA2LQ8IUW3 424 aaPredicted RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 LURAP1LQ8IV03 231 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 DENND6AQ8IWF6 608 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PLD5Q8N7P1 536 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZMIZ2Q8NF64 920 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 RNF183Q96D59 192 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PHF21BQ96EK2 531 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 LBHD1Q9BQE6 289 aaPredicted RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 CLK4Q9HAZ1 481 aaKnown RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 SPATS2LQ9NUQ6 558 aaKnown RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 IL36RNQ9UBH0 155 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PEMTQ9UBM1 199 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 PCDHGB5Q9Y5G0 923 aa3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 TRIP12Q14669 1992 aaPredicted RBP3.36□□□□□ -1.87
RNU4-48P-201ENST00000365559 ARHGAP10A1A4S6 786 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 KRTAP29-1A8MX34 341 aaPredicted RBP3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 TEX22C9J3V5 150 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 EBAG9O00559 213 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 URODP06132 367 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 EDN2P20800 178 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 ITGB8P26012 769 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 CCKBRP32239 447 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 RYKP34925 604 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 PSMC2P35998 433 aaKnown RBP3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 AMTP48728 403 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 PDLIM4P50479 330 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 ADORA2A-AS1P86434 159 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 TLE2Q04725 743 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 TRAF3Q13114 568 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 TDRD12Q587J7 1177 aaKnown RBP3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZNF766Q5HY98 468 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 SLC22A25Q6T423 547 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 LRRC8DQ7L1W4 858 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 FAM160B2Q86V87 743 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMTC1Q8IUR5 882 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 EXOC8Q8IYI6 725 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 USP13Q92995 863 aaPredicted RBP3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZBTB10Q96DT7 871 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 CDT1Q9H211 546 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 SNTG1Q9NSN8 517 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM51Q9NW97 253 aa3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 CNOT7Q9UIV1 285 aaKnown RBP3.35□□□□□ -1.87
RNU4-48P-201ENST00000365559 IGHV4-28A0A0C4DH34 117 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 C4orf47A7E2U8 309 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 KLRF2D3W0D1 207 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 J3KR12 359 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 TIMM23O14925 209 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 HOXC11O43248 304 aaPredicted RBP3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 ATP2C2O75185 946 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 GLUD1P00367 558 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 HNRNPA1P09651 372 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CBSLP0DN79 551 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 TFPIP10646 304 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 SRD5A1P18405 259 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CBSP35520 551 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 GGT5P36269 586 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 GPD2P43304 727 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 GLUD2P49448 558 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 MXI1P50539 228 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 EFNA5P52803 228 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CDH15P55291 814 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CLDN2P57739 230 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CYP4A11Q02928 519 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 DSC1Q08554 894 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 TRPC3Q13507 836 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 PRAMEF19Q5SWL8 479 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CES5AQ6NT32 575 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 C8orf82Q6P1X6 216 aaPredicted RBP3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 BHLHA9Q7RTU4 235 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 FJX1Q86VR8 437 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 MB21D2Q8IYB1 491 aaPredicted RBP3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 SMAP1Q8IYB5 467 aaPredicted RBP3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 CLIP4Q8N3C7 705 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 TNIP2Q8NFZ5 429 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 OR14A16Q8NHC5 309 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 NUDCD2Q8WVJ2 157 aa3.34□□□□□ -1.87
RNU4-48P-201ENST00000365559 HVCN1Q96D96 273 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms