RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TTI1O43156 1089 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 METTL18O95568 372 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 MMP2P08253 660 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 NFKB1P19838 968 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 RECQLP46063 649 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 SCNN1BP51168 640 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 CCNHP51946 323 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 AP1S1P61966 158 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 DSC2Q02487 901 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 PTK6Q13882 451 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 CWF19L1Q69YN2 538 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 ARHGEF18Q6ZSZ5 1173 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 PRPF39Q86UA1 669 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 JAMLQ86YT9 394 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 NOA1Q8NC60 698 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 CHST14Q8NCH0 376 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 FAM129BQ96TA1 746 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 CHRDQ9H2X0 955 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 MFSD1Q9H3U5 465 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 NOD2Q9HC29 1040 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 CD248Q9HCU0 757 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 RSPH14Q9UHP6 348 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 CKAP5Q14008 2032 aa12.56□□□□□ -0.4
NIF3L1-201ENST00000359683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 ALOX15BO15296 676 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 RAD51CO43502 376 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 BNIP3LO60238 219 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 ATG13O75143 517 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 GJB3O75712 270 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 C7P10643 843 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 HOXB2P14652 356 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 MAPK8P45983 427 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 SKOR1P84550 965 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 RAD51Q06609 339 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 ELAVL3Q14576 367 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 SLC14A2Q15849 920 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 KCTD19Q17RG1 926 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 KIAA1211LQ6NV74 962 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 SYT13Q7L8C5 426 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 STK40Q8N2I9 435 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 FLCNQ8NFG4 579 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 CCHCR1Q8TD31 782 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 LRIG1Q96JA1 1093 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 GORASP1Q9BQQ3 440 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 HEPHQ9BQS7 1158 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 ETNK1Q9HBU6 452 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 WASF2Q9Y6W5 498 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 SYNCRIPO60506 623 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 IVDP26440 423 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 PSMB4P28070 264 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 FDFT1P37268 417 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 MAGEA9P43362 315 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 CLCN5P51795 746 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 GRM3Q14832 879 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 STARD3Q14849 445 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 TRIP13Q15645 432 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 CRY1Q16526 586 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 GLE1Q53GS7 698 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 RYBPQ8N488 228 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 TMIEQ8NEW7 156 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 OR6K2Q8NGY2 324 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 SPATA22Q8NHS9 363 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 OXNAD1Q96HP4 312 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 TUBGCP5Q96RT8 1024 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 RBM15Q96T37 977 aaKnown RBP eCLIP12.55□□□□□ -0.49e-7■■■■□ 19.6
NIF3L1-201ENST00000359683 IER2Q9BTL4 223 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 RAB6BQ9NRW1 208 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 DLGAP2Q9P1A6 1054 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 FAM153AQ9UHL3 310 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 PPM1HQ9ULR3 514 aa12.55□□□□□ -0.4
NIF3L1-201ENST00000359683 PI15O43692 258 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 ANXA9O76027 345 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 MT-CYBP00156 380 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 DCNP07585 359 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 CTSLP07711 333 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 SERPINF2P08697 491 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 AOC1P19801 751 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 GKP32189 559 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 CD86P42081 329 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 COPAP53621 1224 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 GEMP55040 296 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 GPS1Q13098 491 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 SEMA5AQ13591 1074 aa12.54□□□□□ -0.4
NIF3L1-201ENST00000359683 PRPSAP1Q14558 356 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms