RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ZBTB49Q6ZSB9 765 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 NPAS2Q99743 824 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 GLOD4Q9HC38 313 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 DOLKQ9UPQ8 538 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 PSMD12O00232 456 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 MAGEC1O60732 1142 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 SOAT2O75908 522 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 CHRNGP07510 517 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 CYP3A5P20815 502 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ATP5F1P24539 256 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 PRKCHP24723 683 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 NFKBIAP25963 317 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ALDH1A3P47895 512 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 EIF2B2P49770 351 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 IDH3AP50213 366 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 VEPH1Q14D04 833 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 INSCQ1MX18 579 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 FAM110CQ1W6H9 321 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 CRYBG2Q8N1P7 616 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF786Q8N393 782 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 EXOC2Q96KP1 924 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 PKP3Q9Y446 797 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 C2orf81A6NN90 581 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 NRP1O14786 923 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 OAS1P00973 400 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 RAD51Q06609 339 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 LBRQ14739 615 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 PLEKHG4Q58EX7 1191 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 HEATR4Q86WZ0 1026 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 TREML1Q86YW5 311 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 OLIG1Q8TAK6 271 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 HDAC10Q969S8 669 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 SPATA17Q96L03 361 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 NFKBIZQ9BYH8 718 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 GBA3Q9H227 469 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 STN1Q9H668 368 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 PIDD1Q9HB75 910 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 SMPD4Q9NXE4 827 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 CDH22Q9UJ99 828 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 DNAJB2P25686 324 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 GCAP28676 217 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 TKTP29401 623 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 NFYCQ13952 458 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 SLC22A9Q8IVM8 553 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 LPCAT1Q8NF37 534 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 SCAMP5Q8TAC9 235 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 DNAJC1Q96KC8 554 aaKnown RBP12.38□□□□□ -0.43
COL20A1-201ENST00000358894 ADNPQ9H2P0 1102 aa12.38□□□□□ -0.43
COL20A1-201ENST00000358894 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PROZP22891 400 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 YWHAQP27348 245 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 CHRNA4P43681 627 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 SLC11A2P49281 568 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PRKAA2P54646 552 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 OXCT1P55809 520 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PKN3Q6P5Z2 889 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 FBXO44Q9H4M3 255 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 SH3GLB1Q9Y371 365 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 TMEM114B3SHH9 223 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 ITGB6P18564 788 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 LPCAT2Q7L5N7 544 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 SNX31Q8N9S9 440 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 S100A14Q9HCY8 104 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 UXTQ9UBK9 157 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 SLC27A5Q9Y2P5 690 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 VPS26AO75436 327 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 FCGRTP55899 365 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 TMEM198Q66K66 360 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 RNF180Q86T96 592 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PATL1Q86TB9 770 aaKnown RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 TP53INP2Q8IXH6 220 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 H0Y626 953 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PRRG1O14668 218 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms