RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CACUL1Q86Y37 369 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 MMAAQ8IVH4 418 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 UMODL1-AS1Q8N2C9 162 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 DTWD2Q8NBA8 298 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SH3KBP1Q96B97 665 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 NUS1Q96E22 293 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 PDLIM2Q96JY6 352 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SLC13A1Q9BZW2 595 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 PPCSQ9HAB8 311 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 GLOD4Q9HC38 313 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 IQANK1A0A1B0GTG1 560 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 BCLAF3A2AJT9 711 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 F5H423 210 aaPredicted RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 CSNK1DP48730 415 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 CACNA2D1P54289 1103 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 LONP2Q86WA8 852 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 BRSK1Q8TDC3 778 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 KLHL32Q96NJ5 620 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 HSD3B7Q9H2F3 369 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 THAP10Q9P2Z0 257 aaPredicted RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 UBA6A0AVT1 1052 aaPredicted RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 SDR42E2A6NKP2 422 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 ANHXE9PGG2 379 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 GLP2RO95838 553 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 EGFP01133 1207 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 APRTP07741 180 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 CST6Q15828 149 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 ZNF805Q5CZA5 627 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 KLHL35Q6PF15 583 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 APTXQ7Z2E3 356 aaKnown RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 MAGEC3Q8TD91 643 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PANX3Q96QZ0 392 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 LINC00597Q9H2U6 94 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PABPC3Q9H361 631 aaKnown RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 KDM4CQ9H3R0 1056 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 CACNA2D2Q9NY47 1150 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 FBXO4Q9UKT5 387 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 MFSD11O43934 449 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 ITGAVP06756 1048 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 ZNF7P17097 686 aaPredicted RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 PPIDQ08752 370 aaKnown RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 LLGL1Q15334 1064 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 LEKR1Q6ZMV7 388 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 LMNTD2Q8IXW0 634 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PTPRN2Q92932 1015 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 HDAC11Q96DB2 347 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 SCYL1Q96KG9 808 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 CLPBQ9H078 707 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PCED1AQ9H1Q7 454 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 GBA3Q9H227 469 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 SAYSD1Q9NPB0 183 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 MMP17Q9ULZ9 603 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 DOCK3Q8IZD9 2030 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 FTH1P02794 183 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 HIST1H2AGP0C0S8 130 aaPredicted RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 HIST1H2ADP20671 130 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PRKAA1Q13131 559 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 BEND7Q8N7W2 519 aaPredicted RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 ACTL9Q8TC94 416 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
UPF2-202ENST00000357604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.29□□□□□ -0.92
UPF2-202ENST00000357604 HIST1H2AHQ96KK5 128 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 HIST1H2AJQ99878 128 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 H2AFJQ9BTM1 129 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 SLC27A6Q9Y2P4 619 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 HEBP2Q9Y5Z4 205 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 PPFIA2O75334 1257 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 ANXA6P08133 673 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 ALPIP09923 528 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 TAS2R40P59535 323 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 NOMO1Q15155 1222 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 DAB2IPQ5VWQ8 1189 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 FAM83CQ9BQN1 747 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 EPC1Q9H2F5 836 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 CYTH4Q9UIA0 394 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
UPF2-202ENST00000357604 SNX2O60749 519 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 DAB2P98082 770 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 GUCY2DQ02846 1103 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 NAB1Q13506 487 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 MORF4L2Q15014 288 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 SLC14A2Q15849 920 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 TEX44Q53QW1 395 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 ADGRG2Q8IZP9 1017 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 SLC39A13Q96H72 371 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 MICAL3Q7RTP6 2002 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 CCDC151A5D8V7 595 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 NEMP2A6NFY4 417 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 LOC730098B7Z3J9 87 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 MEFVO15553 781 aaPredicted RBP9.28□□□□□ -0.92
UPF2-202ENST00000357604 SEMA4FO95754 770 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 NDST3O95803 873 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 PCCBP05166 539 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 FECHP22830 423 aa9.28□□□□□ -0.92
UPF2-202ENST00000357604 SLC8A1P32418 973 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms