RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RCOR3Q9P2K3 495 aaPredicted RBP6.9□□□□□ -1.3
RTN4-203ENST00000357376 DNAJB4Q9UDY4 337 aa6.9□□□□□ -1.3
RTN4-203ENST00000357376 IPPQ9Y573 584 aa6.9□□□□□ -1.3
RTN4-203ENST00000357376 COL5A3P25940 1745 aaPredicted RBP6.9□□□□□ -1.3
RTN4-203ENST00000357376 A0A1B0GVG6 124 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 CLOCKO15516 846 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ALBP02768 609 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 FASP25445 335 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 GALK1P51570 392 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 RPS6KA3P51812 740 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PRKAA2P54646 552 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 NR1H2P55055 460 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ADARP55265 1226 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 MAP3K10Q02779 954 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ARHGAP1Q07960 439 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ZBTB17Q13105 803 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ADGRE1Q14246 886 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 NADK2Q4G0N4 442 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 NOMO2Q5JPE7 1267 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 C10orf120Q5SQS8 335 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ARHGAP17Q68EM7 881 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ZNF280DQ6N043 979 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 TIGD7Q6NT04 549 aaPredicted RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 MRNIPQ6NTE8 343 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PKN3Q6P5Z2 889 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 TLK2Q86UE8 772 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 GPC2Q8N158 579 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PTGR2Q8N8N7 351 aaPredicted RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 TRPC4APQ8TEL6 797 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 HEXDCQ8WVB3 486 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PKP2Q99959 881 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 MRPL57Q9BQC6 102 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 TRIM62Q9BVG3 475 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 OXSMQ9NWU1 459 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 AFF4Q9UHB7 1163 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 NDUFAF1Q9Y375 327 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ORC6Q9Y5N6 252 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PDE4DIPQ5VU43 2346 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 SF3B1O75533 1304 aaKnown RBP eCLIP6.9□□□□□ -1.312e-6■■■■■ 75.3
RTN4-203ENST00000357376 SYCE1LA8MT33 242 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 NRP1O14786 923 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 TADA2AO75478 443 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ENDOD1O94919 500 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PFKMP08237 780 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 DARSP14868 501 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 CKMT2P17540 419 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 HDCP19113 662 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 PROZP22891 400 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 GLUD2P49448 558 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 USP46P62068 366 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 TSTA3Q13630 321 aaPredicted RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 FRG1Q14331 258 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 CAPRIN1Q14444 709 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 IMPG1Q17R60 797 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 EPGNQ6UW88 154 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ADCY4Q8NFM4 1077 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 GATA6Q92908 595 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 BHMTQ93088 406 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 MYLPFQ96A32 169 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 BTBD9Q96Q07 612 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ZBTB18Q99592 522 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 BRD8Q9H0E9 1235 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ABHD16BQ9H3Z7 469 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 ENTPD7Q9NQZ7 604 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 EIF2B3Q9NR50 452 aaKnown RBP6.9□□□□□ -1.31
RTN4-203ENST00000357376 CPA4Q9UI42 421 aa6.9□□□□□ -1.31
RTN4-203ENST00000357376 SLX4Q8IY92 1834 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 BEST1O76090 585 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 GLP2RO95838 553 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 CXCR3P49682 368 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 SERPINH1P50454 418 aaKnown RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 WNT3AP56704 352 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 IL23RQ5VWK5 629 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 OVOS1Q6IE37 1185 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 DNAJC14Q6Y2X3 702 aaPredicted RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 SLC22A9Q8IVM8 553 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 PNPLA1Q8N8W4 532 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 RDH11Q8TC12 318 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 MAGEE2Q8TD90 523 aaPredicted RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 GIPC2Q8TF65 315 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 HDAC10Q969S8 669 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 ULK4Q96C45 1275 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 PCED1BQ96HM7 432 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 FCRL2Q96LA5 508 aaPredicted RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 SEPT5Q99719 369 aaPredicted RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 PAIP1Q9H074 479 aaKnown RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 COQ10BQ9H8M1 238 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 TBC1D23Q9NUY8 699 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 FAM8A1Q9UBU6 413 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 SLC2A6Q9UGQ3 507 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 EMCNQ9ULC0 261 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 SNX5Q9Y5X3 404 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 COPG1Q9Y678 874 aaKnown RBP6.89□□□□□ -1.31
RTN4-203ENST00000357376 A0A087X1B8 175 aa6.89□□□□□ -1.31
RTN4-203ENST00000357376 IGKV6-21A0A0C4DH24 114 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms