RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 AKT1S1Q96B36 256 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 FANCFQ9NPI8 374 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 BTBD3Q9Y2F9 522 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 MFHAS1Q9Y4C4 1052 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RBM7Q9Y580 266 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SNPHO15079 494 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 GRM6O15303 877 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 CCNYL3P0C7X3 344 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 ALPPL2P10696 532 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 NQO1P15559 274 aaKnown RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 IRF8Q02556 426 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 AP5B1Q2VPB7 878 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 PROSER1Q86XN7 944 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 DEFB106AQ8N104 65 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 ITFG1Q8TB96 612 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 FAXDC2Q96IV6 333 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 HGH1Q9BTY7 390 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 SEMA4BQ9NPR2 832 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 SCN2BO60939 215 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 RBMXL2O75526 392 aaKnown RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 ELFN1P0C7U0 828 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 SP100P23497 879 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 RPL21P46778 160 aaKnown RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 CDK7P50613 346 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 CCNIQ14094 377 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 LSM12Q3MHD2 195 aaKnown RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 TIMM50Q3ZCQ8 353 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 FAM98AQ8NCA5 519 aaKnown RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 OR10H5Q8NGA6 315 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF563Q8TA94 476 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 RIPOR3Q96MK2 946 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 UNKQ9C0B0 810 aaKnown RBP5.59□□□□□ -1.52
PTPRD-202ENST00000356435 SLC24A3Q9HC58 644 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 CMTM6Q9NX76 183 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 CLIC5Q9NZA1 410 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 CKLFQ9UBR5 152 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 LIMD1Q9UGP4 676 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF780BQ9Y6R6 833 aa5.59□□□□□ -1.52
PTPRD-202ENST00000356435 LRRC72A6NJI9 287 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RASGRP1O95267 797 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MED26O95402 600 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LDLRP01130 860 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TPH1P17752 444 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 HDCP19113 662 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 AKT2P31751 481 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CD86P42081 329 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CASP7P55210 303 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 EPS8Q12929 822 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 FRG1Q14331 258 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ACAP1Q15027 740 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SMU1Q2TAY7 513 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PCID2Q5JVF3 399 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RGMBQ6NW40 437 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SLC47A2Q86VL8 602 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ATCAYQ86WG3 371 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MCOLN2Q8IZK6 566 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CASKIN2Q8WXE0 1202 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SEPHS2Q99611 448 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PDCD10Q9BUL8 212 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PHPT1Q9NRX4 125 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 HCN3Q9P1Z3 774 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 HEY2Q9UBP5 337 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SYNPO2Q9UMS6 1093 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CAPN6Q9Y6Q1 641 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LINC00854A0A1B0GVQ3 168 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 EFCAB10A6NFE3 127 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MRASO14807 208 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MAGEB3O15480 346 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MFN2O95140 757 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 NFATC1O95644 943 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LTA4HP09960 611 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 YBX3P16989 372 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 WASHC2DQ5SRD0 308 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 DDI2Q5TDH0 399 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LIN54Q6MZP7 749 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF549Q6P9A3 640 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GALNT15Q8N3T1 639 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SLC5A5Q92911 643 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 POP5Q969H6 163 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 VCPIP1Q96JH7 1222 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 INVSQ9Y283 1065 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ACTL7BQ9Y614 415 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3DA0A087WVF3 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3IA0A087WXS9 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3EA0A087X179 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3KA0A087X1G2 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3FA6NER0 549 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3LB9A6J9 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SLC28A1O00337 649 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 VAPBO95292 243 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3HP0C7X1 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MASP1P48740 699 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 DNAJC3Q13217 504 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3GQ6DHY5 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3CQ6IPX1 549 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 DNAJC14Q6Y2X3 702 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D3Q8IZP1 549 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 FRMD6Q96NE9 622 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PIF1Q9H611 641 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms