RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 VWA7Q9Y334 891 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 PCDHGA7Q9Y5G6 932 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 LINC00854A0A1B0GVQ3 168 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 ERVV-1B6SEH8 477 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 TRIM24O15164 1050 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 CDKN2BP42772 138 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 PSME3P61289 254 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 MAMLD1Q13495 774 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 ZNF181Q2M3W8 571 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
RTN3-205ENST00000356000 CYBRD1Q53TN4 286 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 LEMD2Q8NC56 503 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 TMEM35BQ8NCS4 154 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 PHF10Q8WUB8 498 aaKnown RBP15.9■□□□□ 0.14
RTN3-205ENST00000356000 ASB2Q96Q27 587 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 GON7Q9BXV9 100 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 MRPL47Q9HD33 250 aaKnown RBP15.9■□□□□ 0.14
RTN3-205ENST00000356000 RPRD1BQ9NQG5 326 aaKnown RBP15.9■□□□□ 0.14
RTN3-205ENST00000356000 C8orf4Q9NR00 106 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 ABCB10Q9NRK6 738 aa15.9■□□□□ 0.14
RTN3-205ENST00000356000 WARS2Q9UGM6 360 aaKnown RBP15.9■□□□□ 0.14
RTN3-205ENST00000356000 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
RTN3-205ENST00000356000 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 TCAF2A6NFQ2 919 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 PIK3R2O00459 728 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 NRP1O14786 923 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 RASAL1O95294 804 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 LIN9Q5TKA1 542 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 LRRC38Q5VT99 294 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 ZNF544Q6NX49 715 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 PMF1Q6P1K2 205 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 STXBP4Q6ZWJ1 553 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 SPRED1Q7Z699 444 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 CAND1Q86VP6 1230 aaKnown RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 LDHDQ86WU2 507 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 CCDC103Q8IW40 242 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 LGI2Q8N0V4 545 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 ACTL9Q8TC94 416 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 MARVELD3Q96A59 401 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 GIMAP5Q96F15 307 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 DACH2Q96NX9 599 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 NPAS2Q99743 824 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 C1QTNF7Q9BXJ2 289 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 PLSCR3Q9NRY6 295 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 TOPORSQ9NS56 1045 aaPredicted RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 UCKL1Q9NWZ5 548 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 PMF1-BGLAPU3KQ54 211 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 RNF103-CHMP3A0A140T963 221 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 TK2O00142 265 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 SLC9A3R1O14745 358 aaPredicted RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 HTR2BP41595 481 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 NSFP46459 744 aaKnown RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 HCAR3P49019 387 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 DPYSL3Q14195 570 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 POLD3Q15054 466 aaPredicted RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 NSUN4Q96CB9 384 aaKnown RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 ZFYVE19Q96K21 471 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 IDI2Q9BXS1 227 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 KCNN2Q9H2S1 579 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 RNPEPQ9H4A4 650 aa15.89■□□□□ 0.13
RTN3-205ENST00000356000 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
RTN3-205ENST00000356000 HDAC3O15379 428 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 GAS2O43903 313 aaKnown RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 USP12O75317 370 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 EGFRP00533 1210 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 PRKCGP05129 697 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 RPS6P62753 249 aaKnown RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 CATSPEREQ5SY80 951 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 CYP2R1Q6VVX0 501 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 BRSK2Q8IWQ3 736 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 UNC45BQ8IWX7 931 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 ZNF444Q8N0Y2 327 aaPredicted RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 CANT1Q8WVQ1 401 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 BCL7BQ9BQE9 202 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 POPDC2Q9HBU9 364 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 ZBTB26Q9HCK0 441 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 TOR4AQ9NXH8 423 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 PAQR5Q9NXK6 330 aaPredicted RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 ZC3H7BQ9UGR2 993 aaKnown RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 VPS4AQ9UN37 437 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 AP3M1Q9Y2T2 418 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 MYH9P35579 1960 aaKnown RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
RTN3-205ENST00000356000 HEATR9A2RTY3 570 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 E7ENX8 843 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 B4GAT1O43505 415 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 CALCAP01258 141 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 ICAM2P13598 275 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 WEE1P30291 646 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 SLC26A3P40879 764 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 C5orf22Q49AR2 442 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 STEAP3Q658P3 488 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 MAMSTRQ6ZN01 415 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 BBS12Q6ZW61 710 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 BTBD2Q9BX70 525 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 UNC93B1Q9H1C4 597 aa15.88■□□□□ 0.13
RTN3-205ENST00000356000 SAE1Q9UBE0 346 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms