RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GRM5P41594 1212 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 NR4A2P43354 598 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 RPS3AP61247 264 aaKnown RBP7.71□□□□□ -1.17
BRCA1-201ENST00000352993 TGFB2P61812 414 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 RFTN1Q14699 578 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-201ENST00000352993 HERC3Q15034 1050 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 IMPG1Q17R60 797 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 MAMDC4Q6UXC1 1216 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 SFRP1Q8N474 314 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 AFAP1L2Q8N4X5 818 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.17
BRCA1-201ENST00000352993 RBBP8Q99708 897 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 TRIM8Q9BZR9 551 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 KLHL8Q9P2G9 620 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-201ENST00000352993 NOTOA8MTQ0 251 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PTGES3LE9PB15 166 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 NR5A2O00482 541 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 SNAP29O95721 258 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 INHBBP09529 407 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 TPH1P17752 444 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 CAPGP40121 348 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PLK1P53350 603 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 RPS6KA2Q15349 733 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 NDUFA5Q16718 116 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 BROXQ5VW32 411 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 C4orf22Q6V702 233 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 FAM183BPQ6ZVS7 135 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 SLC22A16Q86VW1 577 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 CLEC4FQ8N1N0 589 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 TMEM130Q8N3G9 435 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ANKFN1Q8N957 763 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 RAB2BQ8WUD1 216 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 SNX19Q92543 992 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 KCNN1Q92952 543 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 GLMNQ92990 594 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 OTUD5Q96G74 571 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF347Q96SE7 839 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 GGA3Q9NZ52 723 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 SNX5Q9Y5X3 404 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 COL11A2P13942 1736 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 CCDC162PA2VCL2 907 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 AURKAO14965 403 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 NRP2O60462 931 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 GCATO75600 419 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ITGBL1O95965 494 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 APBA3O96018 575 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ALOX5P09917 674 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ADSLP30566 484 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 LIMK2P53671 638 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 MLLT10P55197 1068 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 CLDN10P78369 228 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 CLCQ05315 142 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PTPN11Q06124 597 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PIGFQ07326 219 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 CAPRIN1Q14444 709 aaKnown RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PPP1R3AQ16821 1122 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 FUT11Q495W5 492 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 NEPROQ6NW34 567 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 FAM160B2Q86V87 743 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PIGZQ86VD9 579 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ACVR1CQ8NER5 493 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 PSMA8Q8TAA3 256 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 SYTL5Q8TDW5 730 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 HDAC10Q969S8 669 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 VPS39Q96JC1 886 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 DACH2Q96NX9 599 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 HGH1Q9BTY7 390 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 MARCH7Q9H992 704 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 NANOGQ9H9S0 305 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 ABCB10Q9NRK6 738 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 DDX28Q9NUL7 540 aaKnown RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 TBC1D13Q9NVG8 400 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 SMPD3Q9NY59 655 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-201ENST00000352993 TMEM9Q9P0T7 183 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 XPR1Q9UBH6 696 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 MFHAS1Q9Y4C4 1052 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 FOCADQ5VW36 1801 aa7.71□□□□□ -1.18
BRCA1-201ENST00000352993 KCNK1O00180 336 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 RNF103O00237 685 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 XYLBO75191 536 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ZBTB7AO95365 584 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TSPAN8P19075 237 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 IL4RP24394 825 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 GNL1P36915 607 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ARL4AP40617 200 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TRPC1P48995 793 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ATXN1P54253 815 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CNTN2Q02246 1040 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TRAP1Q12931 704 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 PPIL2Q13356 520 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF460Q14592 562 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 OXA1LQ15070 435 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 PGM5Q15124 567 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CCNYL2Q5T2Q4 361 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 FAM117BQ6P1L5 589 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 RPS27LQ71UM5 84 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 VASH1Q7L8A9 365 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 AKAP14Q86UN6 197 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 WDR49Q8IV35 697 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms