RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 APOBEC2Q9Y235 224 aaKnown RBP14.06□□□□□ -0.16
TRIM4-201ENST00000349062 TMEM233B4DJY2 109 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 HNRNPLP14866 589 aaKnown RBP eCLIP14.05□□□□□ -0.163e-8■■■□□ 17.7
TRIM4-201ENST00000349062 TYMPP19971 482 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 MPSTP25325 297 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 MSX2P35548 267 aaPredicted RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SERPINB5P36952 375 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 VHLP40337 213 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ARL1P40616 181 aaPredicted RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SLC1A2P43004 574 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SLC25A3Q00325 362 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 IRF5Q13568 498 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 GEN1Q17RS7 908 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 GRTP1Q5TC63 336 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 BNIPLQ7Z465 357 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 PHC3Q8NDX5 983 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 HDAC10Q969S8 669 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 CADM1Q9BY67 442 aaKnown RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 NUF2Q9BZD4 464 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SSU72Q9NP77 194 aaKnown RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ARHGEF38Q9NXL2 777 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 WASF2Q9Y6W5 498 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SF3B1O75533 1304 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 hCG_2014768A0A024R1R8 64 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 FAM95CA0A1B0GW59 222 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 DCXO43602 365 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 CABYRO75952 493 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 PGM1P36871 562 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 DSC1Q08554 894 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 BRMS1LQ5PSV4 323 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 CEP97Q8IW35 865 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 TRIM42Q8IWZ5 723 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ST13P5Q8NFI4 369 aaPredicted RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 WWP1Q9H0M0 922 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 BPIFA1Q9NP55 256 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 PDCD11Q14690 1871 aaKnown RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 TRPM7Q96QT4 1865 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 USP1O94782 785 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 IGHA2P01877 340 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 GALTP07902 379 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 FGF3P11487 239 aaPredicted RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 GABRB3P28472 473 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 EPHA3P29320 983 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 LIMK2P53671 638 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SLC18A1P54219 525 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 PKN3Q6P5Z2 889 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ATP6V0D2Q8N8Y2 350 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 FBXO22Q8NEZ5 403 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 WDR60Q8WVS4 1066 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 PGAP3Q96FM1 320 aaPredicted RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 OSBPL2Q9H1P3 480 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 NOL6Q9H6R4 1146 aaKnown RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 SARS2Q9NP81 518 aaKnown RBP14.05□□□□□ -0.16
TRIM4-201ENST00000349062 THAP1Q9NVV9 213 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 XPR1Q9UBH6 696 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 ARL5AQ9Y689 179 aa14.05□□□□□ -0.16
TRIM4-201ENST00000349062 TXNDC9O14530 226 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 PRRG1O14668 218 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 CFLARO15519 480 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 MAP3K7O43318 606 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 PDE5AO76074 875 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 TOMM70O94826 608 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 GJA1P17302 382 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 CCNCP24863 283 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 VEGFBP49765 207 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 GEMP55040 296 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 TAS2R39P59534 338 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 NEPROQ6NW34 567 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 TMEM135Q86UB9 458 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRIM4-201ENST00000349062 RNF148Q8N7C7 305 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 PIWIL2Q8TC59 973 aaKnown RBP14.04□□□□□ -0.16
TRIM4-201ENST00000349062 MRGPRX2Q96LB1 330 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 HAPLN3Q96S86 360 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.04□□□□□ -0.161e-5■■■□□ 18
TRIM4-201ENST00000349062 EIF2B3Q9NR50 452 aaKnown RBP14.04□□□□□ -0.16
TRIM4-201ENST00000349062 SOX13Q9UN79 622 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 RALGAPA2Q2PPJ7 1873 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 MOXD2PA6NHM9 499 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 AHCYL1O43865 530 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 TBX10O75333 385 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 PROCP04070 461 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 CD1EP15812 388 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 NPY2RP49146 381 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 AIF1P55008 147 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 OCRLQ01968 901 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 HSF5Q4G112 596 aaPredicted RBP14.04□□□□□ -0.16
TRIM4-201ENST00000349062 PCID2Q5JVF3 399 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 STEAP4Q687X5 459 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 MBLAC2Q68D91 279 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 KCTD11Q693B1 232 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 RGS9BPQ6ZS82 235 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 PIM3Q86V86 326 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 TBATAQ96M53 351 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms