RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SEPT6Q14141 434 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 KCTD2Q14681 263 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 NEDD8Q15843 81 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 DNAJC14Q6Y2X3 702 aaPredicted RBP18.86■□□□□ 0.61
SCARF1-202ENST00000348987 CHST15Q7LFX5 561 aaPredicted RBP18.86■□□□□ 0.61
SCARF1-202ENST00000348987 NANOGNBQ7Z5D8 188 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 KIF12Q96FN5 646 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 EIF2AQ9BY44 585 aaKnown RBP18.86■□□□□ 0.61
SCARF1-202ENST00000348987 ADARB2Q9NS39 739 aaKnown RBP18.86■□□□□ 0.61
SCARF1-202ENST00000348987 A0A0G2JMZ2 1700 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 LRRC37A2A6NM11 1700 aa18.86■□□□□ 0.61
SCARF1-202ENST00000348987 SCN1AP35498 2009 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 MYO18AQ92614 2054 aaKnown RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TCRBV3S1A0A5B6 114 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 KRBA1A5PL33 1030 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TK2O00142 265 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 HDCP19113 662 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 ADSLP30566 484 aaPredicted RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 SDC4P31431 198 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 PGGT1BP53609 377 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 NAGLUP54802 743 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 NSUN2Q08J23 767 aaKnown RBP eCLIP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 BOLA3Q53S33 107 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TMEM214Q6NUQ4 689 aaKnown RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 GALNT18Q6P9A2 607 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 C4orf22Q6V702 233 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TNIP2Q8NFZ5 429 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TAMM41Q96BW9 452 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 ZMAT2Q96NC0 199 aaKnown RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 DRC3Q9H069 523 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 MUC3BQ9H195 1237 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 CCDC68Q9H2F9 335 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 GINS2Q9Y248 185 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 MYF6P23409 242 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 RPS3AP61247 264 aaKnown RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 NFATC3Q12968 1075 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 EML3Q32P44 896 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 GRTP1Q5TC63 336 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 KCTD8Q6ZWB6 473 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 STRA8Q7Z7C7 330 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 CANT1Q8WVQ1 401 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TRUB1Q8WWH5 349 aaKnown RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 CERS2Q96G23 380 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 UHRF1Q96T88 793 aaPredicted RBP18.85■□□□□ 0.61
SCARF1-202ENST00000348987 AGAP2Q99490 1192 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 ADI1Q9BV57 179 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 DPEP3Q9H4B8 488 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 GIN1Q9NXP7 522 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 TRIP11Q15643 1979 aa18.85■□□□□ 0.61
SCARF1-202ENST00000348987 HEATR9A2RTY3 570 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 TMEM233B4DJY2 109 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 LGALS2P05162 132 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 CYP2F1P24903 491 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 MAP4P27816 1152 aaKnown RBP18.84■□□□□ 0.61
SCARF1-202ENST00000348987 SLC26A2P50443 739 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 RBP5P82980 135 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 KIZQ2M2Z5 673 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 TRIM16LQ309B1 348 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 PKDCCQ504Y2 493 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 HEATR6Q6AI08 1181 aaKnown RBP18.84■□□□□ 0.61
SCARF1-202ENST00000348987 ACVR1CQ8NER5 493 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 RBBP8Q99708 897 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 CPNE1Q99829 537 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 EFHD1Q9BUP0 239 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 NFKBIZQ9BYH8 718 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 CEP41Q9BYV8 373 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 UNC93B1Q9H1C4 597 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 PALMDQ9NP74 551 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 GMPR2Q9P2T1 348 aaKnown RBP18.84■□□□□ 0.61
SCARF1-202ENST00000348987 FAM149AA5PLN7 773 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 GOLGA8TH3BQL2 631 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 TSPAN1O60635 241 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 SNAP91O60641 907 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 C2P06681 752 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 MAGEA12P43365 314 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 IREB2P48200 963 aaKnown RBP18.84■□□□□ 0.61
SCARF1-202ENST00000348987 NME5P56597 212 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 ARHGAP1Q07960 439 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 MERTKQ12866 999 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 C6orf183Q5T699 404 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 LAYNQ6UX15 382 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 OFCC1Q8IZS5 231 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 C7orf31Q8N865 590 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 ANKFN1Q8N957 763 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 SLC35F5Q8WV83 523 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 CDCA5Q96FF9 252 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 FBXL20Q96IG2 436 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 FCRL3Q96P31 734 aaPredicted RBP18.84■□□□□ 0.61
SCARF1-202ENST00000348987 SACM1LQ9NTJ5 587 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 MORF4L1Q9UBU8 362 aa18.84■□□□□ 0.61
SCARF1-202ENST00000348987 TRIM24O15164 1050 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 ARSAP15289 507 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 YAP1P46937 504 aaKnown RBP18.83■□□□□ 0.61
SCARF1-202ENST00000348987 SLC6A3Q01959 620 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 NAB1Q13506 487 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 LRRC8EQ6NSJ5 796 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 IGFN1Q86VF2 1251 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 PYROXD2Q8N2H3 581 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms