RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 NUDCD1Q96RS6 583 aa21.72■■□□□ 1.07
TSPAN3-202ENST00000346495 RANBP9Q96S59 729 aa21.72■■□□□ 1.07
TSPAN3-202ENST00000346495 SSU72Q9NP77 194 aaKnown RBP21.72■■□□□ 1.07
TSPAN3-202ENST00000346495 SCUBE2Q9NQ36 999 aa21.72■■□□□ 1.07
TSPAN3-202ENST00000346495 ZFATQ9P243 1243 aa21.72■■□□□ 1.07
TSPAN3-202ENST00000346495 PRKAG3Q9UGI9 489 aa21.72■■□□□ 1.07
TSPAN3-202ENST00000346495 FAM155BO75949 473 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 MT-ND3P03897 115 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 HLA-DPA1P20036 260 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 NMBRP28336 390 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 PLK1P53350 603 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 CDK18Q07002 472 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 LINGO4Q6UY18 593 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 APCDD1Q8J025 514 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 VN1R2Q8NFZ6 395 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 MRPL38Q96DV4 380 aaKnown RBP21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 NOD2Q9HC29 1040 aa21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 INTS9Q9NV88 658 aaKnown RBP21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 SMG5Q9UPR3 1016 aaKnown RBP21.71■■□□□ 1.07
TSPAN3-202ENST00000346495 HEATR9A2RTY3 570 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 SLC9A3R1O14745 358 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 PRPF4O43172 522 aaKnown RBP eCLIP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 UGT1A9O60656 530 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 GJB3O75712 270 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 PENKP01210 267 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 FGF1P05230 155 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 ERVK-10P10266 1014 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 RGRP47804 291 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 SCNN1BP51168 640 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 PPARDQ03181 441 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 NSUN2Q08J23 767 aaKnown RBP eCLIP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 CBX2Q14781 532 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 SIRPB2Q5JXA9 342 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 TMEM25Q86YD3 366 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 CELF5Q8N6W0 485 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 KIAA1958Q8N8K9 716 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 ZNF557Q8N988 423 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 ALKBH8Q96BT7 664 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 UGT1A7Q9HAW7 530 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 UGT1A10Q9HAW8 530 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 UGT1A8Q9HAW9 530 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 NKIRAS1Q9NYS0 192 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 CLEC4EQ9ULY5 219 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 C2orf16Q68DN1 1984 aa21.7■■□□□ 1.06
TSPAN3-202ENST00000346495 LAMA2P24043 3122 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 CXorf51AA0A1B0GTR3 108 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 ATXN1LP0C7T5 689 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 KRT4P19013 534 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 LSP1P33241 339 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 SLC18A1P54219 525 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 PDPK2PQ6A1A2 396 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 METTL3Q86U44 580 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 KCNMB4Q86W47 210 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 C4orf33Q8N1A6 199 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 IRF7Q92985 503 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 SPHK2Q9NRA0 654 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 C20orf96Q9NUD7 363 aaPredicted RBP21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 TXNDC16Q9P2K2 825 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 LHX3Q9UBR4 397 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 ARIH1Q9Y4X5 557 aaPredicted RBP21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 FAM47DPA6NHR8 397 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 SRRM3A6NNA2 597 aaPredicted RBP21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 TRIM49D1C9J1S8 452 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 NDST3O95803 873 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 PAMP19021 973 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 CD70P32970 193 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 LAMB3Q13751 1172 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 SEPT6Q14141 434 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 PLEKHG6Q3KR16 790 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 RALGPS1Q5JS13 557 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 PACS1Q6VY07 963 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 EXOC2Q96KP1 924 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 LMLNQ96KR4 655 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 CPNE1Q99829 537 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 BBS2Q9BXC9 721 aa21.69■■□□□ 1.06
TSPAN3-202ENST00000346495 GP5P40197 560 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 RHOAP61586 193 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 SLC20A2Q08357 652 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 MSLNQ13421 630 aaPredicted RBP21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 RARS2Q5T160 578 aaKnown RBP21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 ANKRD42Q8N9B4 389 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 ATXN2LQ8WWM7 1075 aaKnown RBP21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 ZNF778Q96MU6 729 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 LINC00597Q9H2U6 94 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 IGFLR1Q9H665 355 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 NSMCE4AQ9NXX6 385 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 IL1RAPL1Q9NZN1 696 aa21.68■■□□□ 1.06
TSPAN3-202ENST00000346495 NEDD8-MDP1E9PL57 170 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 RFXAPO00287 272 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 SPAG7O75391 227 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 ALADP13716 330 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 FSHRP23945 695 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 BMP8BP34820 402 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 DNAJC3Q13217 504 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 TEDDM1Q5T9Z0 273 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 GRTP1Q5TC63 336 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 NLRP9Q7RTR0 991 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 TIFAQ96CG3 184 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 SGSM3Q96HU1 749 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 TRIB3Q96RU7 358 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms