RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HOMEZQ8IX15 550 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 UNC5BQ8IZJ1 945 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 ZDHHC14Q8IZN3 488 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 CLYBLQ8N0X4 340 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 AZIN2Q96A70 460 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 MPP4Q96JB8 637 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 TRMOQ9BU70 441 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 ZNF395Q9H8N7 513 aaPredicted RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 ZNF556Q9HAH1 456 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SPAG4Q9NPE6 437 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 CATSPERZQ9NTU4 200 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 TMEM161AQ9NX61 479 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SCHIP1Q9P0W5 487 aaPredicted RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 GIT1Q9Y2X7 761 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 AP4B1Q9Y6B7 739 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 A0A087WXM4 84 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SYNDIG1LA6NDD5 238 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 TK2O00142 265 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SCAMP3O14828 347 aaKnown RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 IVDP26440 423 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 PRIM2P49643 509 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 NEK3P51956 506 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 BFSP2Q13515 415 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SCIMPQ6UWF3 145 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 RINLQ6ZS11 566 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 MON1AQ86VX9 555 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 GPSM1Q86YR5 675 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 CENPLQ8N0S6 344 aaPredicted RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 NKAPQ8N5F7 415 aaKnown RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 DDHD1Q8NEL9 900 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 NXNL1Q96CM4 212 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 EXOC2Q96KP1 924 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SNX27Q96L92 541 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 RMND5AQ9H871 391 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 S100A14Q9HCY8 104 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SMIM31A0A1B0GVY4 71 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 CCDC154A6NI56 674 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 RAD51BO15315 384 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 COL6A2P12110 1019 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 PTPN3P26045 913 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 MZF1P28698 734 aaPredicted RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 ATP5C1P36542 298 aaKnown RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 HALP42357 657 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SLC25A11Q02978 314 aaKnown RBP7.26□□□□□ -1.25
VCAN-202ENST00000342785 SQLEQ14534 574 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SPDYE7PQ495Y7 208 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 STXBP5Q5T5C0 1151 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 DNAJB14Q8TBM8 379 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 C9orf16Q9BUW7 83 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 LIMD1Q9UGP4 676 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SLC7A8Q9UHI5 535 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 TRAF6Q9Y4K3 522 aa7.26□□□□□ -1.25
VCAN-202ENST00000342785 SEC22BO75396 215 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 SERPIND1P05546 499 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 DAOAP59103 153 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 TEPSINQ96N21 525 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 RTKNQ9BST9 563 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 ZMYM5Q9UJ78 669 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 TBKBP1A7MCY6 615 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 BTBD19C9JJ37 291 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 AZIN1O14977 448 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 TBX10O75333 385 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 MT-CYBP00156 380 aaPredicted RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 TUFMP49411 452 aaKnown RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 TAS2R39P59534 338 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 FAM110CQ1W6H9 321 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 FAM45BPQ6NSW5 357 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 IL27RAQ6UWB1 636 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 B3GNT9Q6UX72 402 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 CUZD1Q86UP6 607 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 RELL1Q8IUW5 271 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 CDYL2Q8N8U2 506 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 FAM45AQ8TCE6 357 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 C6orf203Q9P0P8 240 aaPredicted RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 ABLIM1O14639 778 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 PPEF2O14830 753 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 VPS4BO75351 444 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 MAP3K10Q02779 954 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 PRKD1Q15139 912 aaPredicted RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 RALGPS1Q5JS13 557 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 CRYBG2Q8N1P7 616 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 ATAD1Q8NBU5 361 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 TEKT5Q96M29 485 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 TSPAN18Q96SJ8 248 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 COMMD8Q9NX08 183 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 CDH22Q9UJ99 828 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 ZNF112Q9UJU3 913 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 PCDHB12Q9Y5F1 795 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 AHCYL1O43865 530 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 SMPD1P17405 629 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 MAPK1P28482 360 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 TRPC1P48995 793 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 PRKG2Q13237 762 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 NEDD8Q15843 81 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 SYPL2Q5VXT5 272 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 ZNF781Q8N8C0 355 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 NPAS2Q99743 824 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 SENP6Q9GZR1 1112 aaPredicted RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 ANAPC2Q9UJX6 822 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms