RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 FAM172AQ8WUF8 416 aa10.53□□□□□ -0.72
TPM3-207ENST00000341372 ERP27Q96DN0 273 aa10.53□□□□□ -0.72
TPM3-207ENST00000341372 RPRD1AQ96P16 312 aaPredicted RBP10.53□□□□□ -0.72
TPM3-207ENST00000341372 CNPY3Q9BT09 278 aa10.53□□□□□ -0.72
TPM3-207ENST00000341372 CLEC4MQ9H2X3 399 aaPredicted RBP10.53□□□□□ -0.72
TPM3-207ENST00000341372 POLMQ9NP87 494 aaPredicted RBP10.53□□□□□ -0.72
TPM3-207ENST00000341372 PARVAQ9NVD7 372 aa10.53□□□□□ -0.72
TPM3-207ENST00000341372 VANGL2Q9ULK5 521 aa10.53□□□□□ -0.72
TPM3-207ENST00000341372 STON1Q9Y6Q2 735 aa10.53□□□□□ -0.72
TPM3-207ENST00000341372 A0A087X0T9 212 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 SSU72P8A0A1W2PR75 194 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 BLACEA4D250 179 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CLDN11O75508 207 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 B3GALT4O96024 378 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 FAM228BP0C875 321 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 ADRA1BP35368 520 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 SOX18P35713 384 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 GGCXP38435 758 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 IL12RB1P42701 662 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 RECQLP46063 649 aaPredicted RBP10.52□□□□□ -0.73
TPM3-207ENST00000341372 RPIAP49247 311 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 OGDHQ02218 1023 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 ZNF234Q14588 700 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CDO1Q16878 200 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 ASTE1Q2TB18 679 aaPredicted RBP10.52□□□□□ -0.73
TPM3-207ENST00000341372 MBLAC2Q68D91 279 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 PDZD3Q86UT5 571 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CIR1Q86X95 450 aaPredicted RBP10.52□□□□□ -0.73
TPM3-207ENST00000341372 DNAAF5Q86Y56 855 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CARNMT1Q8N4J0 409 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 KDM1BQ8NB78 822 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 LRRN4CLQ8ND94 238 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 GAB3Q8WWW8 586 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 ZNF653Q96CK0 615 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CIPCQ9C0C6 399 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 TMEM245Q9H330 911 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 ABHD10Q9NUJ1 306 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CACNA2D2Q9NY47 1150 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 ZNF212Q9UDV6 495 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 CNOT8Q9UFF9 292 aaKnown RBP10.52□□□□□ -0.73
TPM3-207ENST00000341372 NEU3Q9UQ49 428 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 TBC1D30Q9Y2I9 924 aa10.52□□□□□ -0.73
TPM3-207ENST00000341372 EP300Q09472 2414 aaPredicted RBP10.52□□□□□ -0.73
TPM3-207ENST00000341372 TMEM191CA6NGB0 347 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 ALDH1A2O94788 518 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 LMNAP02545 664 aaKnown RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 EPHX1P07099 455 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 DLDP09622 509 aaKnown RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 SCNN1BP51168 640 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 AIF1P55008 147 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 CDH4P55283 916 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 OXCT1P55809 520 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 ARL13BQ3SXY8 428 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 PITRM1Q5JRX3 1037 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 DCUN1D2Q6PH85 259 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 IGF2-ASQ6U949 168 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 ASCL5Q7RTU5 278 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 CCDC117Q8IWD4 279 aaPredicted RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 NXPE1Q8N323 547 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 SORCS1Q8WY21 1168 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 ALG14Q96F25 216 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 RETREG1Q9H6L5 497 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 PPARGC1AQ9UBK2 798 aaKnown RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 SNX10Q9Y5X0 201 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 TCRBV21S2A2A0A5A6 115 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 TCRBV16S1A1N1A0A5B0 115 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 A6NNZ2 444 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 E9PAM4 449 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 H0Y626 953 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 ATP5BP06576 529 aaKnown RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 GABRG2P18507 467 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 CSKP41240 450 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 PXNP49023 591 aaPredicted RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 ANO7Q6IWH7 933 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 CNGA4Q8IV77 575 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 CCDC185Q8N715 623 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 OR52K2Q8NGK3 314 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 PPP1R14AQ96A00 147 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 MRGPRX3Q96LB0 322 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 SIK2Q9H0K1 926 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 POLG2Q9UHN1 485 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 SMG5Q9UPR3 1016 aaKnown RBP10.51□□□□□ -0.73
TPM3-207ENST00000341372 OR51B4Q9Y5P0 310 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 ZNF292O60281 2723 aa10.51□□□□□ -0.73
TPM3-207ENST00000341372 WASH3PC4AMC7 463 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 CYP1A2P05177 515 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
TPM3-207ENST00000341372 TPM1P09493 284 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 POLR2EP19388 210 aaKnown RBP10.5□□□□□ -0.73
TPM3-207ENST00000341372 PRKCHP24723 683 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 WASP42768 502 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 SRSF5Q13243 272 aaKnown RBP10.5□□□□□ -0.73
TPM3-207ENST00000341372 SLC18A3Q16572 532 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 WIPI1Q5MNZ9 446 aaPredicted RBP10.5□□□□□ -0.73
TPM3-207ENST00000341372 ALKBH5Q6P6C2 394 aaKnown RBP10.5□□□□□ -0.73
TPM3-207ENST00000341372 TMC6Q7Z403 805 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 SETD3Q86TU7 594 aaPredicted RBP10.5□□□□□ -0.73
TPM3-207ENST00000341372 CYB5D2Q8WUJ1 264 aa10.5□□□□□ -0.73
TPM3-207ENST00000341372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM3-207ENST00000341372 TRIM7Q9C029 511 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms