RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ABT1Q9ULW3 272 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 RUVBL2Q9Y230 463 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 AURKAO14965 403 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 KLHL2O95198 593 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 CALRP27797 417 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 HADHAP40939 763 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 WNT3AP56704 352 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 MAXP61244 160 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 FAM189BP81408 668 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 MS4A13Q5J8X5 152 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 KDELC1Q6UW63 502 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 ZYG11AQ6WRX3 759 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 PAXIP1Q6ZW49 1069 aaPredicted RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 HMCESQ96FZ2 354 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 C8orf48Q96LL4 319 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 KLHL5Q96PQ7 755 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 SH3GL3Q99963 347 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 DDX50Q9BQ39 737 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 UNKQ9C0B0 810 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 ANKRD6Q9Y2G4 727 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 CDY1Q9Y6F8 540 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 TMEM114B3SHH9 223 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 TMEM189-UBE2V1I3L0A0 370 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 ZBTB14O43829 449 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 MPSTP25325 297 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 TBX4P57082 545 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 EFEMP1Q12805 493 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 DLG1Q12959 904 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 PSMD5Q16401 504 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 C11orf91Q3C1V1 193 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 TMCO4Q5TGY1 634 aa20.33■□□□□ 0.85
SPG7-202ENST00000341316 FSTL5Q8N475 847 aaPredicted RBP20.33■□□□□ 0.85
SPG7-202ENST00000341316 TDRD5Q8NAT2 981 aaKnown RBP20.33■□□□□ 0.85
SPG7-202ENST00000341316 FAM95CA0A1B0GW59 222 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 TTC24A2A3L6 582 aaPredicted RBP20.33■□□□□ 0.84
SPG7-202ENST00000341316 TARM1B6A8C7 271 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 NCF2P19878 526 aaPredicted RBP20.33■□□□□ 0.84
SPG7-202ENST00000341316 SLC10A7Q0GE19 358 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 CDC16Q13042 620 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 SEPT6Q14141 434 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 CCDC117Q8IWD4 279 aaPredicted RBP20.33■□□□□ 0.84
SPG7-202ENST00000341316 PNPLA1Q8N8W4 532 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 FUBP3Q96I24 572 aaKnown RBP eCLIP20.33■□□□□ 0.84
SPG7-202ENST00000341316 GPR78Q96P69 363 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 TRAPPC9Q96Q05 1148 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 NR1H4Q96RI1 486 aaPredicted RBP20.33■□□□□ 0.84
SPG7-202ENST00000341316 FAM96AQ9H5X1 160 aa20.33■□□□□ 0.84
SPG7-202ENST00000341316 LYNP07948 512 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 CD1EP15812 388 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 CRABP2P29373 138 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 GRIA4P48058 902 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 PEX6Q13608 980 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 SLC12A1Q13621 1099 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 RALGPS1Q5JS13 557 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 ZNF280DQ6N043 979 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 RNF180Q86T96 592 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 UMODL1-AS1Q8N2C9 162 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 STYXQ8WUJ0 223 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 SCYL1Q96KG9 808 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 OR52B2Q96RD2 323 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 NT5MQ9NPB1 228 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 E9PBE3 544 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 DCXO43602 365 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 BUD23O43709 281 aaKnown RBP20.32■□□□□ 0.84
SPG7-202ENST00000341316 KLHL41O60662 606 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 FKBP6O75344 327 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 TADA2AO75478 443 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 ZCCHC18P0CG32 403 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 MYL4P12829 197 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 NFE2Q16621 373 aaPredicted RBP20.32■□□□□ 0.84
SPG7-202ENST00000341316 LIPMQ5VYY2 423 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 ZNF470Q6ECI4 717 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 C2CD4AQ8NCU7 369 aaPredicted RBP20.32■□□□□ 0.84
SPG7-202ENST00000341316 IGSF8Q969P0 613 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 NXNL1Q96CM4 212 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 SLC25A51Q9H1U9 297 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 FBXO44Q9H4M3 255 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 MRM3Q9HC36 420 aaKnown RBP20.32■□□□□ 0.84
SPG7-202ENST00000341316 PDP2Q9P2J9 529 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 SLC27A5Q9Y2P5 690 aa20.32■□□□□ 0.84
SPG7-202ENST00000341316 NAGLUP54802 743 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 RAB10P61026 200 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 UGP2Q16851 508 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 ZNF789Q5FWF6 425 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 CWF19L1Q69YN2 538 aaKnown RBP20.31■□□□□ 0.84
SPG7-202ENST00000341316 LRRC8EQ6NSJ5 796 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 MIB1Q86YT6 1006 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 PTCD2Q8WV60 388 aaKnown RBP20.31■□□□□ 0.84
SPG7-202ENST00000341316 PYDC1Q8WXC3 89 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 IMP4Q96G21 291 aaKnown RBP20.31■□□□□ 0.84
SPG7-202ENST00000341316 ZYG11BQ9C0D3 744 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 DRC3Q9H069 523 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 S100A14Q9HCY8 104 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 ACOT9Q9Y305 439 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 PCDHB5Q9Y5E4 795 aa20.31■□□□□ 0.84
SPG7-202ENST00000341316 DLX3O60479 287 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 APOA4P06727 396 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 MMP2P08253 660 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 RHOQP17081 205 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms