RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 TSPAN6O43657 245 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 MMP20O60882 483 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 LRIG2O94898 1065 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 PLEKP08567 350 aaPredicted RBP16.59■□□□□ 0.25
H3F3C-201ENST00000340398 RHOQP17081 205 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
H3F3C-201ENST00000340398 FMO1Q01740 532 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 ISXQ2M1V0 245 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 TCP11X2Q5H9J9 407 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 PERM1Q5SV97 790 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 ZCCHC8Q6NZY4 707 aaKnown RBP16.59■□□□□ 0.25
H3F3C-201ENST00000340398 TTC7BQ86TV6 843 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 CCDC185Q8N715 623 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 OR2AP1Q8NGE2 309 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 CENPTQ96BT3 561 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 C11orf70Q9BRQ4 267 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 KLC2Q9H0B6 622 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 VPS16Q9H269 839 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 POLR1BQ9H9Y6 1135 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 MBNL1Q9NR56 388 aaKnown RBP16.59■□□□□ 0.25
H3F3C-201ENST00000340398 TMEM248Q9NWD8 314 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 NEU3Q9UQ49 428 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 CSNK1G3Q9Y6M4 447 aa16.59■□□□□ 0.25
H3F3C-201ENST00000340398 PMS2P1A4D2B8 440 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 H3BM21 787 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 BUB1O43683 1085 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 POP4O95707 220 aaKnown RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 CYP1A1P04798 512 aaPredicted RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 MMP8P22894 467 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ADKP55263 362 aaKnown RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 HDAC4P56524 1084 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 PCBP4P57723 403 aaKnown RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 SNRPD1P62314 119 aaKnown RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 NRG1Q02297 640 aaPredicted RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 POLD3Q15054 466 aaPredicted RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ARL13BQ3SXY8 428 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ARHGAP40Q5TG30 622 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 VPS36Q86VN1 386 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 PYROXD2Q8N2H3 581 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ZNF843Q8N446 348 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ASB12Q8WXK4 309 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 RAB7BQ96AH8 199 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ATXN7L3BQ96GX2 97 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 PCDHB18PQ96TA0 734 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 IL12RB2Q99665 862 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 MAGEH1Q9H213 219 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 GANQ9H2C0 597 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 NOL6Q9H6R4 1146 aaKnown RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 USP29Q9HBJ7 922 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 ASCL3Q9NQ33 180 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 SALL4Q9UJQ4 1053 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 HPCAL4Q9UM19 191 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 SATB2Q9UPW6 733 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 COL27A1Q8IZC6 1860 aaPredicted RBP16.58■□□□□ 0.24
H3F3C-201ENST00000340398 CFAP46Q8IYW2 2715 aa16.58■□□□□ 0.24
H3F3C-201ENST00000340398 SETXQ7Z333 2677 aaKnown RBP16.57■□□□□ 0.24
H3F3C-201ENST00000340398 TEX51A0A1B0GUA7 166 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 AREL1O15033 823 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 MUSKO15146 869 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 EPHB6O15197 1021 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 INSIG1O15503 277 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 KLK10O43240 276 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 KDELR3O43731 214 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 RAMP2O60895 175 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 DXOO77932 396 aaKnown RBP16.57■□□□□ 0.24
H3F3C-201ENST00000340398 GSRP00390 522 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 TIMP2P16035 220 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 SDC4P31431 198 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 RFC1P35251 1148 aaPredicted RBP16.57■□□□□ 0.24
H3F3C-201ENST00000340398 IGFALSP35858 605 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 MAPKAPK2P49137 400 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 POLR2FP61218 127 aaKnown RBP16.57■□□□□ 0.24
H3F3C-201ENST00000340398 CDR2Q01850 454 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 C3orf38Q5JPI3 329 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 GDPD4Q6W3E5 623 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 ZNF354CQ86Y25 554 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 LSMEM2Q8N112 164 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 FAM172AQ8WUF8 416 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 CENPIQ92674 756 aaPredicted RBP16.57■□□□□ 0.24
H3F3C-201ENST00000340398 VCPIP1Q96JH7 1222 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 ENTPD2Q9Y5L3 495 aa16.57■□□□□ 0.24
H3F3C-201ENST00000340398 EME2A4GXA9 379 aaPredicted RBP16.56■□□□□ 0.24
H3F3C-201ENST00000340398 TMCC1O94876 653 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 CELA2BP08218 269 aaPredicted RBP16.56■□□□□ 0.24
H3F3C-201ENST00000340398 ETFBP38117 255 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 ERVPABLB-1P60509 514 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
H3F3C-201ENST00000340398 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 NR0B2Q15466 257 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 TCEA2Q15560 299 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 PRRT3Q5FWE3 981 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 FAXCQ5TGI0 409 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 FOXR1Q6PIV2 292 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 NYAP1Q6ZVC0 841 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 STRADAQ7RTN6 431 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 ZNF677Q86XU0 584 aa16.56■□□□□ 0.24
H3F3C-201ENST00000340398 SLC35F3Q8IY50 421 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms