RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ANK1P16157 1881 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 OR51F1A6NGY5 319 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 BOLA2-SMG1P6H3BVE0 249 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 PSMD12O00232 456 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 SOCS2O14508 198 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 SDHDO14521 159 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 STRNO43815 780 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 BCAS2O75934 225 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 LRPAP1P30533 357 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 GLUD2P49448 558 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 FAM83EQ2M2I3 478 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 REP15Q6BDI9 236 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 TMEM102Q8N9M5 508 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 RMND5BQ96G75 393 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 BRD8Q9H0E9 1235 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 OSBPL2Q9H1P3 480 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 VRTNQ9H8Y1 702 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 TRIM38O00635 465 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 TADA2AO75478 443 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CCDC166P0CW27 439 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CCR3P51677 355 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NR1H2P55055 460 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 IKBKEQ14164 716 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 PLCL1Q15111 1095 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 TSTD2Q5T7W7 516 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 STRADAQ7RTN6 431 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 DDIASQ8IXT1 998 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 KDM1BQ8NB78 822 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CNDP1Q96KN2 507 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 ZFRQ96KR1 1074 aaKnown RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 WDCPQ9H6R7 721 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 ALG9Q9H6U8 611 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 RBPJLQ9UBG7 517 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 RSL24D1Q9UHA3 163 aaKnown RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 HEATR9A2RTY3 570 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CYP2B6P20813 491 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NR4A1P22736 598 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 AFF1P51825 1210 aaKnown RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NEDD8Q15843 81 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 METTL21CQ5VZV1 264 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 TRIM74Q86UV6 250 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 TRIM73Q86UV7 250 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 DCBLD1Q8N8Z6 715 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 C11orf84Q9BUA3 381 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 TMCO1Q9UM00 188 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 PCDHGA7Q9Y5G6 932 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CEPT1Q9Y6K0 416 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 LRIG2O94898 1065 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 SETSIPP0DME0 302 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NCK1P16333 377 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 ZNF26P17031 533 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NOS2P35228 1153 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 VPS26BQ4G0F5 336 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 ZFP1Q6P2D0 407 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 TTC33Q6PID6 262 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CLEC14AQ86T13 490 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 EXOC8Q8IYI6 725 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CBR4Q8N4T8 237 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 CNTD1Q8N815 330 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 OR52K2Q8NGK3 314 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NCKIPSDQ9NZQ3 722 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 NDUFA13Q9P0J0 144 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 BTRCQ9Y297 605 aa16.29■□□□□ 0.2
SCARB1-202ENST00000339570 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 ACOT8O14734 319 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 CABYRO75952 493 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 RAB10P61026 200 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 CDH17Q12864 832 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 DCTN2Q13561 401 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 DUS1LQ6P1R4 473 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 PIM3Q86V86 326 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 AHI1Q8N157 1196 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 SH3RF2Q8TEC5 729 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 TMEM30AQ9NV96 361 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 CPA4Q9UI42 421 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 CNOT6Q9ULM6 557 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 PRSS51A0A1B0GVH4 220 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 MYBPHLA2RUH7 354 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 FBP2O00757 339 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 GIPC1O14908 333 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 DCLK1O15075 740 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 MSI1O43347 362 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 PIRTP0C851 137 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 MTHFD1P11586 935 aaKnown RBP16.28■□□□□ 0.2
SCARB1-202ENST00000339570 LPIN1Q14693 890 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 PRAMEF19Q5SWL8 479 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 KLHL35Q6PF15 583 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
SCARB1-202ENST00000339570 FBXL20Q96IG2 436 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms