RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C12orf40Q86WS4 652 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 YAF2Q8IY57 180 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FGF14Q92915 247 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TMEM109Q9BVC6 243 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ROPN1BQ9BZX4 212 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 IL22Q9GZX6 179 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ECT2Q9H8V3 914 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ROPN1Q9HAT0 212 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 HPS4Q9NQG7 708 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 OGFRQ9NZT2 677 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SAMD15Q9P1V8 674 aa14.93□□□□□ -0.02
CDK5RAP3-201ENST00000338399 XIRP2A4UGR9 3374 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 EXOC1LA0A1B0GW35 172 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TCRBV9S1A1TA0A576 114 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SPAG6O75602 509 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PIAS1O75925 651 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PGAM1P18669 254 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CES1P23141 567 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 OAS2P29728 719 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 DGKGP49619 791 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CDK18Q07002 472 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLC20A2Q08357 652 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NSUN2Q08J23 767 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FCHO2Q0JRZ9 810 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PDGFRLQ15198 375 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GEN1Q17RS7 908 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SKIDA1Q1XH10 827 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TTMPQ5BVD1 217 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ATXN7L2Q5T6C5 722 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MBLAC2Q68D91 279 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KIAA0907Q7Z7F0 614 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 AHI1Q8N157 1196 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KRT222Q8N1A0 295 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 IFT43Q96FT9 208 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TM6SF2Q9BZW4 377 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLC25A13Q9UJS0 675 aa14.92□□□□□ -0.02
CDK5RAP3-201ENST00000338399 LOC285095A0A1B0GVY8 99 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 POC1B-GALNT4F8VUJ3 575 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 H3BQ06 376 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GSTA2P09210 222 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CISD3P0C7P0 127 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SRCP12931 536 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PSMC3P17980 439 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SP100P23497 879 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 DMC1Q14565 340 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 POU6F1Q14863 301 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 EFTUD2Q15029 972 aaKnown RBP eCLIP14.91□□□□□ -0.027e-16■□□□□ 10
CDK5RAP3-201ENST00000338399 SLC1A5Q15758 541 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TMEM215Q68D42 235 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CES3Q6UWW8 571 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CCNJLQ8IV13 435 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GSDMBQ8TAX9 411 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ELSPBP1Q96BH3 223 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MRRFQ96E11 262 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 FEM1CQ96JP0 617 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NECTIN4Q96NY8 510 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NAT9Q9BTE0 207 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RPP25Q9BUL9 199 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ACSS3Q9H6R3 686 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ARNT2Q9HBZ2 717 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CD207Q9UJ71 328 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 USP15Q9Y4E8 981 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GOLGA8KD6RF30 607 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RNF40O75150 1001 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TULP3O75386 442 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TCEA3O75764 348 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 IVLP07476 585 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 POLR2EP19388 210 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLC6A11P48066 632 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ECT2LQ008S8 904 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SULT2A1Q06520 285 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SLC14A2Q15849 920 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GAB4Q2WGN9 574 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SIRPB2Q5JXA9 342 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 DGKKQ5KSL6 1271 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 STEAP4Q687X5 459 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 NCEH1Q6PIU2 408 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CROCCP2Q86T23 111 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 SRLQ86TD4 932 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 METTL3Q86U44 580 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ETFBKMTQ8IXQ9 262 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 TNKS2Q9H2K2 1166 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CHRAC1Q9NRG0 131 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 HS3ST2Q9Y278 367 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 PCDHGC4Q9Y5F7 938 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RPS6KL1Q9Y6S9 549 aa14.91□□□□□ -0.02
CDK5RAP3-201ENST00000338399 CXorf51AA0A1B0GTR3 108 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 MAGEB16A2A368 324 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ZNF821O75541 412 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 POLBP06746 335 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 ATXN1LP0C7T5 689 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GCAP28676 217 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 STX2P32856 288 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 RUNX3Q13761 415 aa14.9□□□□□ -0.02
CDK5RAP3-201ENST00000338399 GALNT3Q14435 633 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms