RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 NAIF1Q69YI7 327 aaPredicted RBP23.64■■□□□ 1.38
NDEL1-201ENST00000334527 TIGD7Q6NT04 549 aaPredicted RBP23.64■■□□□ 1.38
NDEL1-201ENST00000334527 BNC2Q6ZN30 1099 aaPredicted RBP23.64■■□□□ 1.38
NDEL1-201ENST00000334527 SETD3Q86TU7 594 aaPredicted RBP23.64■■□□□ 1.38
NDEL1-201ENST00000334527 SGF29Q96ES7 293 aa23.64■■□□□ 1.38
NDEL1-201ENST00000334527 MRGPRX2Q96LB1 330 aa23.64■■□□□ 1.38
NDEL1-201ENST00000334527 PPP1R2P1Q96PQ5 205 aa23.64■■□□□ 1.38
NDEL1-201ENST00000334527 MTG1Q9BT17 334 aaPredicted RBP23.64■■□□□ 1.38
NDEL1-201ENST00000334527 AKR1A1P14550 325 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 XIAPP98170 497 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 ARTNQ5T4W7 220 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 PDCD6IPQ8WUM4 868 aaKnown RBP23.64■■□□□ 1.37
NDEL1-201ENST00000334527 CDRT15Q96T59 188 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 PIDD1Q9HB75 910 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 MPP6Q9NZW5 540 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 FBXO5Q9UKT4 447 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 DSEQ9UL01 958 aa23.64■■□□□ 1.37
NDEL1-201ENST00000334527 TMEM233B4DJY2 109 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 MGEA5O60502 916 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 PAPOLAP51003 745 aaKnown RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 SLC12A2P55011 1212 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 IRX1P78414 480 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 PCSK7Q16549 785 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 RANBP10Q6VN20 620 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 KDM1BQ8NB78 822 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 TXNDC5Q8NBS9 432 aaKnown RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 HEXDCQ8WVB3 486 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 STON2Q8WXE9 905 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 TRAPPC9Q96Q05 1148 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 POMKQ9H5K3 350 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 INPP5FQ9Y2H2 1132 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 A0A087X1B8 175 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 E9PAM4 449 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 M0QZQ0 153 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 CASQ2O14958 399 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 FESP07332 822 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 UQCRBP14927 111 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 CD52P31358 61 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 GRIK1P39086 918 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 THOP1P52888 689 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 MED21Q13503 144 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 MAPRE1Q15691 268 aaKnown RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 KIAA0930Q6ICG6 404 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 SDCCAG8Q86SQ7 713 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 RSPH1Q8WYR4 309 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 GBP5Q96PP8 586 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 MRPL57Q9BQC6 102 aaKnown RBP23.63■■□□□ 1.37
NDEL1-201ENST00000334527 ZBTB26Q9HCK0 441 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 NCKIPSDQ9NZQ3 722 aa23.63■■□□□ 1.37
NDEL1-201ENST00000334527 NPHS1O60500 1241 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 ADSLP30566 484 aaPredicted RBP23.62■■□□□ 1.37
NDEL1-201ENST00000334527 TSPY1Q01534 308 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 TAF1CQ15572 869 aaPredicted RBP23.62■■□□□ 1.37
NDEL1-201ENST00000334527 NOMO2Q5JPE7 1267 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 SH2D4BQ5SQS7 431 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 MAP3K21Q5TCX8 1036 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 SCD5Q86SK9 330 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 THEM5Q8N1Q8 247 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 RTL3Q8N8U3 475 aaKnown RBP23.62■■□□□ 1.37
NDEL1-201ENST00000334527 PADI3Q9ULW8 664 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 HS3ST4Q9Y661 456 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 PTPRDP23468 1912 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 PATJQ8NI35 1801 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 CCDC189A1A4V9 331 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 AURKAO14965 403 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 CFLARO15519 480 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 ITGB1P05556 798 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 CPB1P15086 417 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 POU4F1Q01851 419 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 MGAT3Q09327 533 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 GRAMD1BQ3KR37 738 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 AFMIDQ63HM1 303 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 ZNF280DQ6N043 979 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 NEPROQ6NW34 567 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 C14orf80Q86SX3 495 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 SERINC5Q86VE9 423 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 SPATA2LQ8IUW3 424 aaPredicted RBP23.62■■□□□ 1.37
NDEL1-201ENST00000334527 NLRC5Q86WI3 1866 aa23.62■■□□□ 1.37
NDEL1-201ENST00000334527 DUSP11O75319 330 aaKnown RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 ENO3P13929 434 aaPredicted RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 KPNA2P52292 529 aaKnown RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 WNT3AP56704 352 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 HERC3Q15034 1050 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 RBM20Q5T481 1227 aaKnown RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 CNSTQ6PJW8 725 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 TRIM67Q6ZTA4 783 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 PIWIL4Q7Z3Z4 852 aaKnown RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 ZNF483Q8TF39 744 aaPredicted RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 NDNQ99608 321 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 PRKD2Q9BZL6 878 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 TBC1D13Q9NVG8 400 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 CLIC5Q9NZA1 410 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 PSMD13Q9UNM6 376 aa23.61■■□□□ 1.37
NDEL1-201ENST00000334527 COPG1Q9Y678 874 aaKnown RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 TDRD15B5MCY1 1934 aaKnown RBP23.61■■□□□ 1.37
NDEL1-201ENST00000334527 NEMP2A6NFY4 417 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 F8W810 466 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 TNFRSF10BO14763 440 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 AHCYL1O43865 530 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 KPNA6O60684 536 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms