RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PTPRDP23468 1912 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 MYO16Q9Y6X6 1858 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 NT5C1B-RDH14C9J2C7 533 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SLC10A3P09131 477 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 RPL14P50914 215 aaKnown RBP19.13■□□□□ 0.65
RFTN1-201ENST00000334133 TSTD2Q5T7W7 516 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 NEPROQ6NW34 567 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 LSMEM2Q8N112 164 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 OR6P1Q8NGX9 317 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 LINC01599Q8WXQ3 324 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 CMTM5Q96DZ9 223 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 C1orf21Q9H246 121 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 STN1Q9H668 368 aaKnown RBP19.13■□□□□ 0.65
RFTN1-201ENST00000334133 CDH22Q9UJ99 828 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SORCS3Q9UPU3 1222 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 TLL2Q9Y6L7 1015 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 MAP3K7O43318 606 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 GRID2O43424 1007 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 TADA2AO75478 443 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 TSPAN8P19075 237 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 TBL3Q12788 808 aaKnown RBP19.13■□□□□ 0.65
RFTN1-201ENST00000334133 MS4A13Q5J8X5 152 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SEL1L3Q68CR1 1132 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SNX32Q86XE0 403 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 MYLK4Q86YV6 388 aaPredicted RBP19.13■□□□□ 0.65
RFTN1-201ENST00000334133 NUP93Q8N1F7 819 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SNX31Q8N9S9 440 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 PPFIBP2Q8ND30 876 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 STYXQ8WUJ0 223 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SPDL1Q96EA4 605 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 SERPINB11Q96P15 392 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 OLFM1Q99784 485 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 TBC1D13Q9NVG8 400 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 PCDHB8Q9UN66 801 aa19.13■□□□□ 0.65
RFTN1-201ENST00000334133 MATN2O00339 956 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 KCNA5P22460 613 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 NUDT2P50583 147 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 SLC12A2P55011 1212 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 TXNDC5Q8NBS9 432 aaKnown RBP19.12■□□□□ 0.65
RFTN1-201ENST00000334133 GPR78Q96P69 363 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 DRC3Q9H069 523 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 ENTPD7Q9NQZ7 604 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 RNF186Q9NXI6 227 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 TMEM88BA6NKF7 163 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 CFLARO15519 480 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 PSMD3O43242 534 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 CKBP12277 381 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 ACADSP16219 412 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 HOXC13P31276 330 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 CD151P48509 253 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 FRG1Q14331 258 aaKnown RBP19.12■□□□□ 0.65
RFTN1-201ENST00000334133 VARS2Q5ST30 1063 aaKnown RBP19.12■□□□□ 0.65
RFTN1-201ENST00000334133 IZUMO2Q6UXV1 221 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 RNF111Q6ZNA4 994 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 CFAP52Q8N1V2 620 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 LZTR1Q8N653 840 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 SEPT5Q99719 369 aaPredicted RBP19.12■□□□□ 0.65
RFTN1-201ENST00000334133 SP110Q9HB58 689 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 NDE1Q9NXR1 346 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 RAP2CQ9Y3L5 183 aa19.12■□□□□ 0.65
RFTN1-201ENST00000334133 FAM155AB1AL88 458 aaPredicted RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TMEM114B3SHH9 223 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 F8W8V4 182 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 HDAC3O15379 428 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 SMNDC1O75940 238 aaKnown RBP eCLIP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 PEX11BO96011 259 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 MT-CO1P00395 513 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 ARSDP51689 593 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TRIM71Q2Q1W2 868 aaKnown RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 FAM171A1Q5VUB5 890 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 LMNTD2Q8IXW0 634 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 PHF21BQ96EK2 531 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 PPP1R12CQ9BZL4 782 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CRISPLD1Q9H336 500 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TREX1Q9NSU2 369 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 GTSE1Q9NYZ3 720 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CABYRO75952 493 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 LUC7L3O95232 432 aaKnown RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 AP2B1P63010 937 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CCNIQ14094 377 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CTXN3Q4LDR2 81 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 C10orf120Q5SQS8 335 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 MARC1Q5VT66 337 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 LPCAT4Q643R3 524 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CCSAPQ6IQ19 270 aaPredicted RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 POTEHQ6S545 545 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 MON1AQ86VX9 555 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TRIM62Q9BVG3 475 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 POMKQ9H5K3 350 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 ZNF212Q9UDV6 495 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CRYL1Q9Y2S2 319 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 DPPA5A6NC42 116 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CPB1P15086 417 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TYMPP19971 482 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 PIK3R1P27986 724 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 ACVRL1P37023 503 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 PSEN1P49768 467 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 CSRP3P50461 194 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TIGD7Q6NT04 549 aaPredicted RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 FBXL22Q6P050 247 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms