RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 INTS10Q9NVR2 710 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 GDAP2Q9NXN4 497 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 TBC1D14Q9P2M4 693 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 AGO2Q9UKV8 859 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DHRS7Q9Y394 339 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SCN4AP35499 1836 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ITGAVP06756 1048 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CD79BP40259 229 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 C1orf94Q6P1W5 598 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CYP2R1Q6VVX0 501 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SSU72Q9NP77 194 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PTGFRNQ9P2B2 879 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 IFT80Q9P2H3 777 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DHX15O43143 795 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 OGNP20774 298 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 MUTP22033 750 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PPP2R2BQ00005 443 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PAGE2BQ5JRK9 111 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 BBS1Q8NFJ9 593 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF560Q96MR9 790 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SLC52A2Q9HAB3 445 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 RDH8Q9NYR8 311 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 BCS1LQ9Y276 419 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 NRKQ7Z2Y5 1582 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PGRMC2O15173 223 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 RGS14O43566 566 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 OR5F1O95221 314 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SNRPB2P08579 225 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 TGM3Q08188 693 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PITRM1Q5JRX3 1037 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 OR5J2Q8NH18 312 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ASB15Q8WXK1 588 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PRDM8Q9NQV8 689 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SUCOQ9UBS9 1254 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CDH22Q9UJ99 828 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF451Q9Y4E5 1061 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 RPS6KL1Q9Y6S9 549 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 METTL18O95568 372 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 TNNI3P19429 210 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SPATS1Q496A3 300 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 THAP5Q7Z6K1 395 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 AMIGO2Q86SJ2 522 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SLITRK4Q8IW52 837 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM167AQ96KS9 214 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DHX33Q9H6R0 707 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 IKZF3Q9UKT9 509 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PRMT5O14744 637 aaPredicted RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ANXA9O76027 345 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 NR3C2P08235 984 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 RPL14P50914 215 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 MTAPQ13126 283 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DENND5BQ6ZUT9 1274 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CDYL2Q8N8U2 506 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 AKAP1Q92667 903 aaKnown RBP eCLIP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 KAT2AQ92830 837 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CST11Q9H112 138 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PRRG1O14668 218 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 TULP3O75386 442 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 B3GALNT1O75752 331 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 SLC2A4P14672 509 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 GLDCP23378 1020 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DNAJB2P25686 324 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 HARS2P49590 506 aaKnown RBP10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 DEF8Q6ZN54 512 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 CENPSQ8N2Z9 138 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 FNDC5Q8NAU1 212 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF341Q9BYN7 854 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PDGFCQ9NRA1 345 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 PRR12Q9ULL5 1215 aa10.42□□□□□ -0.74
SPTBN1-201ENST00000333896 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF804BA4D1E1 1349 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 PLA2G6O60733 806 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 KCNH1O95259 989 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 RARBP10826 455 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 HOXB8P17481 243 aaPredicted RBP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 DYNLL1P63167 89 aaKnown RBP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 GPR162Q16538 588 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 ENDOVQ8N8Q3 282 aaKnown RBP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 OR52L1Q8NGH7 329 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 C7orf26Q96N11 449 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 TRIT1Q9H3H1 467 aaKnown RBP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 LRRC40Q9H9A6 602 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 CYP3A43Q9HB55 503 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 PCDHA6Q9UN73 950 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 PCDHA8Q9Y5H6 950 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 NUDT7P0C024 238 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 THEGLP0DJG4 465 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 RBP3P10745 1247 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 SMIM11AP58511 58 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 ACOX2Q99424 681 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 CORO1BQ9BR76 489 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 HTATIP2Q9BUP3 242 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 ARMC1Q9NVT9 282 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 REXO2Q9Y3B8 237 aaKnown RBP10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 SVILO95425 2214 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 M0R036 132 aa10.41□□□□□ -0.74
SPTBN1-201ENST00000333896 KRT33AO76009 404 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms