RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 CDK5RAP1Q96SZ6 601 aaKnown RBP12□□□□□ -0.49
LIMK2-202ENST00000333611 IL12RB2Q99665 862 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 EFHD1Q9BUP0 239 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 CAB39LQ9H9S4 337 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 HMG20AQ9NP66 347 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 SLC8A2Q9UPR5 921 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 ANGPTL3Q9Y5C1 460 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 NFASCO94856 1347 aa12□□□□□ -0.49
LIMK2-202ENST00000333611 SYCE1LA8MT33 242 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 CLDN25C9JDP6 229 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 CHADO15335 359 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 FMO4P31512 558 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SELENBP1Q13228 472 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 TRNP1Q6NT89 227 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 C16orf89Q6UX73 402 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 FAM131BQ86XD5 332 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SYTL1Q8IYJ3 562 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 HPDLQ96IR7 371 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SCYL1Q96KG9 808 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PCDHGA7Q9Y5G6 932 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SLX4Q8IY92 1834 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 LACTBL1A8MY62 500 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 HOXC6P09630 235 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PRKACAP17612 351 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 FOXD4Q12950 439 aaPredicted RBP11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PON2Q15165 354 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 GLRA4Q5JXX5 417 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 NIPA2Q8N8Q9 360 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 C1orf127Q8N9H9 656 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 GALNT6Q8NCL4 622 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 TMEM174Q8WUU8 243 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 ZNF486Q96H40 463 aaPredicted RBP11.99□□□□□ -0.49
LIMK2-202ENST00000333611 ACO2Q99798 780 aaKnown RBP11.99□□□□□ -0.49
LIMK2-202ENST00000333611 DPP3Q9NY33 737 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SNTG2Q9NY99 539 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 TMEM216Q9P0N5 145 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 STK39Q9UEW8 545 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 ZNHIT2Q9UHR6 403 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SQORQ9Y6N5 450 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 DOCK5Q9H7D0 1870 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 KCNK1O00180 336 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SNX2O60749 519 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 DBTP11182 482 aaKnown RBP11.99□□□□□ -0.49
LIMK2-202ENST00000333611 RALBP11234 206 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PTGS2P35354 604 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 IDUAP35475 653 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
LIMK2-202ENST00000333611 NFATC3Q12968 1075 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 IKBKEQ14164 716 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 STYK1Q6J9G0 422 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 CYP20A1Q6UW02 462 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 FRA10AC1Q70Z53 315 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 ITIH5Q86UX2 942 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 DDIASQ8IXT1 998 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PYROXD2Q8N2H3 581 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 CADM2Q8N3J6 435 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 OR6B3Q8NGW1 331 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 CLEC4CQ8WTT0 213 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 SNX19Q92543 992 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
LIMK2-202ENST00000333611 KLHL32Q96NJ5 620 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 CTRCQ99895 268 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PIF1Q9H611 641 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 XPNPEP3Q9NQH7 507 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
LIMK2-202ENST00000333611 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
LIMK2-202ENST00000333611 SDR42E2A6NKP2 422 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 TBX1O43435 398 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 HCRTO43612 131 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 MSCO60682 206 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 PGK2P07205 417 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 IDH3AP50213 366 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 AP3M2P53677 418 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 BACE1P56817 501 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 IMPG1Q17R60 797 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 FAM160B1Q5W0V3 765 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 MAP1SQ66K74 1059 aaPredicted RBP11.98□□□□□ -0.49
LIMK2-202ENST00000333611 LYSMD3Q7Z3D4 306 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 TTC39CQ8N584 583 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 CCNYL1Q8N7R7 359 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 SPERTQ8NA61 448 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 MAGEE2Q8TD90 523 aaPredicted RBP11.98□□□□□ -0.49
LIMK2-202ENST00000333611 APBA2Q99767 749 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 EBNA1BP2Q99848 306 aaKnown RBP11.98□□□□□ -0.49
LIMK2-202ENST00000333611 REXO4Q9GZR2 422 aaKnown RBP11.98□□□□□ -0.49
LIMK2-202ENST00000333611 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 AKT3Q9Y243 479 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 A0A1W2PQ72 361 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 SPATA31C2B4DYI2 1134 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 E7ENX8 843 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 XYLBO75191 536 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 AVPR1AP37288 418 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 CASP2P42575 452 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 CCR10P46092 362 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.98□□□□□ -0.49
LIMK2-202ENST00000333611 COPS5Q92905 334 aa11.98□□□□□ -0.49
LIMK2-202ENST00000333611 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms