RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PGAM4Q8N0Y7 254 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 BHLHE22Q8NFJ8 381 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SCAMP5Q8TAC9 235 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 FAR2Q96K12 515 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PIDD1Q9HB75 910 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 TMEM30AQ9NV96 361 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HNRNPLP14866 589 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 BRCC3P46736 316 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 THOP1P52888 689 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 TSGA13Q96PP4 275 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SLC39A8Q9C0K1 460 aa11.83□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NUP205Q92621 2012 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 ZSWIM8A7E2V4 1837 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HAS3O00219 553 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 IRAK2O43187 625 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SNUPNO95149 360 aaKnown RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 DNAJB1P25685 340 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 DLG1Q12959 904 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CENPLQ8N0S6 344 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 GALNT15Q8N3T1 639 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 C3orf58Q8NDZ4 430 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 ZDHHC7Q9NXF8 308 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HEATR9A2RTY3 570 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CHN2P52757 468 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SH3BGRP55822 239 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 STX1BP61266 288 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 LIN52Q52LA3 116 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NDNQ99608 321 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PAAF1Q9BRP4 392 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SP110Q9HB58 689 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MIOSQ9NXC5 875 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SLC2A6Q9UGQ3 507 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 RBP1P09455 135 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 GSTT1P30711 240 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 RENBPP51606 427 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PLK1P53350 603 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 WNT3AP56704 352 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HNRNPDQ14103 355 aaKnown RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CCL14Q16627 93 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CEP97Q8IW35 865 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HEXDCQ8WVB3 486 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 DLG3Q92796 817 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PHF21BQ96EK2 531 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 ZBTB26Q9HCK0 441 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MPP6Q9NZW5 540 aa11.82□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 GRID2O43424 1007 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NPHS1O60500 1241 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 XRCC1P18887 633 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 GABRB3P28472 473 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HTR7P34969 479 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 GALNT4Q8N4A0 578 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NPAS2Q99743 824 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 C1QTNF1Q9BXJ1 281 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CSNK1G1Q9HCP0 422 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NT5MQ9NPB1 228 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 TMEM233B4DJY2 109 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 UBDO15205 165 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PEX1O43933 1283 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 TADA2AO75478 443 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HLA-DQB2P05538 268 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CCDC166P0CW27 439 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 RGS2P41220 211 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CHRNA4P43681 627 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 UPP1Q16831 310 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 KIAA0930Q6ICG6 404 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 TFAP2DQ7Z6R9 452 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 LRRC49Q8IUZ0 686 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 RYBPQ8N488 228 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 DCUN1D1Q96GG9 259 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 COPG1Q9Y678 874 aaKnown RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CCDC189A1A4V9 331 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 NEMP2A6NFY4 417 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MAFKO60675 156 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PGK1P00558 417 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SLC5A3P53794 718 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MAP7Q14244 749 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 HERC3Q15034 1050 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 MARC1Q5VT66 337 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
CSPG4P4Y-201ENST00000333235 KIAA0408Q6ZU52 694 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms