RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RAD9AQ99638 391 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 MGME1Q9BQP7 344 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 CINPQ9BW66 212 aaPredicted RBP15.1■□□□□ 0.01
TPM3-205ENST00000328159 TSSK1BQ9BXA7 367 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 EMCNQ9ULC0 261 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 MYO1CO00159 1063 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 KLF11O14901 512 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 BIRC5O15392 142 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 TBL1XO60907 577 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 SIN3BO75182 1162 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 MPOP05164 745 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 BPGMP07738 259 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 HADHAP40939 763 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 ERVFC1P60507 584 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 C1QTNF8P60827 252 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 CDK18Q07002 472 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 THOC5Q13769 683 aaKnown RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 UGP2Q16851 508 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 TSTD2Q5T7W7 516 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 N4BP2L1Q5TBK1 243 aaPredicted RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 FYB2Q5VWT5 728 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 PSRC1Q6PGN9 363 aaPredicted RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 ZNF783Q6ZMS7 281 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 ZC3HC1Q86WB0 502 aaKnown RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 NUDCD3Q8IVD9 361 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 HJURPQ8NCD3 748 aaPredicted RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 THOC1Q96FV9 657 aaKnown RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 PSKH2Q96QS6 385 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 TCF25Q9BQ70 676 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 MECRQ9BV79 373 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 EMILIN2Q9BXX0 1053 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 MUC3BQ9H195 1237 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 RHOJQ9H4E5 214 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 ABCF3Q9NUQ8 709 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 SIRPGQ9P1W8 387 aa15.09■□□□□ 0.01
TPM3-205ENST00000328159 MTCL1Q9Y4B5 1905 aaKnown RBP15.09■□□□□ 0.01
TPM3-205ENST00000328159 CBX4O00257 560 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 GFRA2O00451 464 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 PAPSS2O95340 614 aaPredicted RBP15.08■□□□□ 0.01
TPM3-205ENST00000328159 IL1BP01584 269 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 EPOP01588 193 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 SERPINF2P08697 491 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 EN2P19622 333 aaPredicted RBP15.08■□□□□ 0.01
TPM3-205ENST00000328159 ZXDBP98169 803 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 GRM3Q14832 879 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 SLC14A2Q15849 920 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 C16orf46Q6P387 395 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 MAB21L3Q8N8X9 362 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 E2F7Q96AV8 911 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 GPR22Q99680 433 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 FAM167BQ9BTA0 163 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 LSM7Q9UK45 103 aaKnown RBP15.08■□□□□ 0.01
TPM3-205ENST00000328159 LZTS1Q9Y250 596 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 IRAK3Q9Y616 596 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 SLC4A7Q9Y6M7 1214 aa15.08■□□□□ 0.01
TPM3-205ENST00000328159 LCHNA4D1U4 455 aa15.08■□□□□ 0
TPM3-205ENST00000328159 H0Y626 953 aa15.08■□□□□ 0
TPM3-205ENST00000328159 PLIN3O60664 434 aa15.08■□□□□ 0
TPM3-205ENST00000328159 GLUD1P00367 558 aa15.08■□□□□ 0
TPM3-205ENST00000328159 FGF1P05230 155 aa15.08■□□□□ 0
TPM3-205ENST00000328159 CKMP06732 381 aa15.08■□□□□ 0
TPM3-205ENST00000328159 TROVE2P10155 538 aaKnown RBP eCLIP15.08■□□□□ 0
TPM3-205ENST00000328159 HLA-DPA1P20036 260 aa15.08■□□□□ 0
TPM3-205ENST00000328159 GABRB3P28472 473 aa15.08■□□□□ 0
TPM3-205ENST00000328159 CTNNB1P35222 781 aa15.08■□□□□ 0
TPM3-205ENST00000328159 BMPR1AP36894 532 aa15.08■□□□□ 0
TPM3-205ENST00000328159 IRX4P78413 519 aa15.08■□□□□ 0
TPM3-205ENST00000328159 SLC7A9P82251 487 aa15.08■□□□□ 0
TPM3-205ENST00000328159 CYTH1Q15438 398 aa15.08■□□□□ 0
TPM3-205ENST00000328159 DBN1Q16643 649 aa15.08■□□□□ 0
TPM3-205ENST00000328159 SPRED3Q2MJR0 410 aa15.08■□□□□ 0
TPM3-205ENST00000328159 ATG16L1Q676U5 607 aa15.08■□□□□ 0
TPM3-205ENST00000328159 NLRP9Q7RTR0 991 aa15.08■□□□□ 0
TPM3-205ENST00000328159 DENND6AQ8IWF6 608 aa15.08■□□□□ 0
TPM3-205ENST00000328159 FAM217AQ8IXS0 508 aa15.08■□□□□ 0
TPM3-205ENST00000328159 CARNMT1Q8N4J0 409 aa15.08■□□□□ 0
TPM3-205ENST00000328159 ACVR1CQ8NER5 493 aa15.08■□□□□ 0
TPM3-205ENST00000328159 RAB3IL1Q8TBN0 382 aa15.08■□□□□ 0
TPM3-205ENST00000328159 TMA16Q96EY4 203 aaKnown RBP15.08■□□□□ 0
TPM3-205ENST00000328159 RMDN2Q96LZ7 410 aa15.08■□□□□ 0
TPM3-205ENST00000328159 CAB39LQ9H9S4 337 aa15.08■□□□□ 0
TPM3-205ENST00000328159 GGT7Q9UJ14 662 aa15.08■□□□□ 0
TPM3-205ENST00000328159 A0A096LPK6 155 aa15.07■□□□□ 0
TPM3-205ENST00000328159 TYW5A2RUC4 315 aaKnown RBP15.07■□□□□ 0
TPM3-205ENST00000328159 MROH6A6NGR9 719 aa15.07■□□□□ 0
TPM3-205ENST00000328159 HIDE1A8MVS5 230 aa15.07■□□□□ 0
TPM3-205ENST00000328159 TLL1O43897 1013 aa15.07■□□□□ 0
TPM3-205ENST00000328159 LUC7L3O95232 432 aaKnown RBP15.07■□□□□ 0
TPM3-205ENST00000328159 C1RP00736 705 aa15.07■□□□□ 0
TPM3-205ENST00000328159 AHSGP02765 367 aa15.07■□□□□ 0
TPM3-205ENST00000328159 PROCP04070 461 aa15.07■□□□□ 0
TPM3-205ENST00000328159 GSTA1P08263 222 aa15.07■□□□□ 0
TPM3-205ENST00000328159 MYL4P12829 197 aa15.07■□□□□ 0
TPM3-205ENST00000328159 CDC25CP30307 473 aa15.07■□□□□ 0
TPM3-205ENST00000328159 SLC1A2P43004 574 aa15.07■□□□□ 0
TPM3-205ENST00000328159 RGRP47804 291 aa15.07■□□□□ 0
TPM3-205ENST00000328159 MPP1Q00013 466 aa15.07■□□□□ 0
TPM3-205ENST00000328159 CTBP1Q13363 440 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms