RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 DQX1Q8TE96 717 aaKnown RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 LRATO95237 230 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 C22orf31O95567 290 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 URODP06132 367 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 LTA4HP09960 611 aaKnown RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 FGFR1P11362 822 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 KLF1Q13351 362 aaPredicted RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 CYP1B1Q16678 543 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 SYTL1Q8IYJ3 562 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 UTP15Q8TED0 518 aaKnown RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 DDX1Q92499 740 aaKnown RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 EDIL3O43854 480 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 LZTS3O60299 673 aaPredicted RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 GABRB2P47870 512 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 CDK7P50613 346 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 IRF9Q00978 393 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 MAP2K5Q13163 448 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 ATP1A4Q13733 1029 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 DHDDSQ86SQ9 333 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 GPSM1Q86YR5 675 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 PGBD3Q8N328 593 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 TPD52L3Q96J77 140 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 CIB1Q99828 191 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF212Q9UDV6 495 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 AP4S1Q9Y587 144 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 CCDC154A6NI56 674 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 KLF10Q13118 480 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 ACSBG2Q5FVE4 666 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 NAPRTQ6XQN6 538 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 MARK2Q7KZI7 788 aaKnown RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 KBTBD2Q8IY47 623 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 SPPL2AQ8TCT8 520 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 PAIP1Q9H074 479 aaKnown RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 FZD8Q9H461 694 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 PCDHGC4Q9Y5F7 938 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 C1orf232A0A0U1RR37 186 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 SLC15A5A6NIM6 579 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 KPNA3O00505 521 aaPredicted RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 AXIN1O15169 862 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 SERPINA6P08185 405 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 ATP5F1P24539 256 aaPredicted RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 HNF4AP41235 474 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 CCNHP51946 323 aaPredicted RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 LRRC8DQ7L1W4 858 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 SLC26A9Q7LBE3 791 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 CENPLQ8N0S6 344 aaPredicted RBP16.63■□□□□ 0.25
CLIP4-201ENST00000320081 FBXW8Q8N3Y1 598 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 FAR2Q96K12 515 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 RBBP8Q99708 897 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 ASB8Q9H765 288 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 CATSPERZQ9NTU4 200 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 PCDHGC3Q9UN70 934 aa16.63■□□□□ 0.25
CLIP4-201ENST00000320081 ITM2AO43736 263 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 TIPRLO75663 272 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 MTA2O94776 668 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 BTG3Q14201 252 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 IRGCQ6NXR0 463 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 TAC4Q86UU9 113 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 RMND5BQ96G75 393 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 VAT1Q99536 393 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 PRKD2Q9BZL6 878 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 IMPAD1Q9NX62 359 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 SIX4Q9UIU6 781 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 HS6ST1O60243 411 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 PRKCGP05129 697 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 OR1D2P34982 312 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 LAMB3Q13751 1172 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 MTX3Q5HYI7 312 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF621Q6ZSS3 439 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 SLC22A9Q8IVM8 553 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF513Q8N8E2 541 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 FTHL17Q9BXU8 183 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 CNGB3Q9NQW8 809 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 ARL15Q9NXU5 204 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 NKX1-2Q9UD57 310 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 SNX8Q9Y5X2 465 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 RGSL1A5PLK6 1076 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 SRRM3A6NNA2 597 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 KCNU1A8MYU2 1149 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 PLIN3O60664 434 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 PSMB9P28065 219 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 LZTR1Q8N653 840 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 BANPQ8N9N5 519 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 FNIP1Q8TF40 1166 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 UCMAQ8WVF2 138 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 NR1H4Q96RI1 486 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 VWA7Q9Y334 891 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 RASSF9O75901 435 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 ZBTB11O95625 1053 aaPredicted RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 AXLP30530 894 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 GSTT1P30711 240 aa16.62■□□□□ 0.25
CLIP4-201ENST00000320081 ATP5C1P36542 298 aaKnown RBP16.62■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF467Q7Z7K2 595 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms