RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 CYTH2Q99418 400 aa31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 TRIM56Q9BRZ2 755 aaKnown RBP31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 SCUBE2Q9NQ36 999 aa31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 EURLQ9NYK6 297 aa31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 LGALS13Q9UHV8 139 aa31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 SLC24A2Q9UI40 661 aa31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 HS3ST2Q9Y278 367 aa31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 FCF1Q9Y324 198 aaKnown RBP31.69■■■□□ 2.66
NECTIN3-201ENST00000319792 KIAA1549LQ6ZVL6 1849 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 BRWD1Q9NSI6 2320 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 TLDC2A0PJX2 215 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 HMGB1P1B2RPK0 211 aaPredicted RBP31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 ARSAP15289 507 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 GCAP28676 217 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 SLCO1A2P46721 670 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 SCNN1BP51168 640 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 RHOAP61586 193 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 SULT2A1Q06520 285 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 RASA2Q15283 850 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 MFSD6LQ8IWD5 586 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 RIBC1Q8N443 379 aaPredicted RBP31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 EXOC2Q96KP1 924 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 NSMCE3Q96MG7 304 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 SOX13Q9UN79 622 aa31.68■■■□□ 2.66
NECTIN3-201ENST00000319792 FAM237BA0A1B0GVD1 139 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 CDH16O75309 829 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 ALDH1A2O94788 518 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 ATXN1LP0C7T5 689 aaKnown RBP31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 LAMP2P13473 410 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 TPH1P17752 444 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 CDK18Q07002 472 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 FRG1Q14331 258 aaKnown RBP31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 CRYMQ14894 314 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 SLC1A5Q15758 541 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 TNFAIP8L3Q5GJ75 292 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 TMEM135Q86UB9 458 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 KIFC1Q9BW19 673 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 POMKQ9H5K3 350 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 MOCS1Q9NZB8 636 aa31.67■■■□□ 2.66
NECTIN3-201ENST00000319792 SMIM23A6NLE4 172 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 K7ERQ8 282 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 CHRNA4P43681 627 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 SPANXN3Q5MJ09 141 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 ADIPOR2Q86V24 386 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 AHI1Q8N157 1196 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 SMRP1Q8NCR6 262 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 PTCD2Q8WV60 388 aaKnown RBP31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 ELSPBP1Q96BH3 223 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 ZFYVE19Q96K21 471 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 NECTIN4Q96NY8 510 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 TRIB3Q96RU7 358 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 DHRS4Q9BTZ2 278 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 CENPHQ9H3R5 247 aa31.66■■■□□ 2.66
NECTIN3-201ENST00000319792 RGS16O15492 202 aaPredicted RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 SMAD6O43541 496 aaKnown RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 ATP9BO43861 1147 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 USP1O94782 785 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 POLBP06746 335 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 CISD3P0C7P0 127 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 HLA-DPA1P20036 260 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 CTSOP43234 321 aaPredicted RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 CSNK1DP48730 415 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 GAB4Q2WGN9 574 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 PCID2Q5JVF3 399 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 NCEH1Q6PIU2 408 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 EP400NLQ6ZTU2 488 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 ETFBKMTQ8IXQ9 262 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 TTC17Q96AE7 1141 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 TLCD1Q96CP7 247 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 EBF3Q9H4W6 596 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 MRM3Q9HC36 420 aaKnown RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 ARIH1Q9Y4X5 557 aaPredicted RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 GBP2P32456 591 aaPredicted RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 MSLNQ13421 630 aaPredicted RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 EFTUD2Q15029 972 aaKnown RBP eCLIP31.65■■■□□ 2.661e-5■■■□□ 15.7
NECTIN3-201ENST00000319792 KBTBD12Q3ZCT8 623 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 SIRPB2Q5JXA9 342 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 ZNF449Q6P9G9 518 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 KDELC2Q7Z4H8 507 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 NAT16Q8N8M0 369 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 ISG20Q96AZ6 181 aaKnown RBP31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 IFT43Q96FT9 208 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 HPS4Q9NQG7 708 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 VPS18Q9P253 973 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 SLC27A6Q9Y2P4 619 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 RPS6KL1Q9Y6S9 549 aa31.65■■■□□ 2.66
NECTIN3-201ENST00000319792 FGF1P05230 155 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 SRCP12931 536 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 IGFBP4P22692 258 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 AP1S1P61966 158 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 MLLT1Q03111 559 aaPredicted RBP31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 SRLQ86TD4 932 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 RNF135Q8IUD6 432 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 SLC25A41Q8N5S1 370 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 WFIKKN2Q8TEU8 576 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 RANBP9Q96S59 729 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 TDRD1Q9BXT4 1180 aaKnown RBP31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 STMN4Q9H169 189 aaPredicted RBP31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 ECT2Q9H8V3 914 aa31.64■■■□□ 2.66
NECTIN3-201ENST00000319792 PRKAG3Q9UGI9 489 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms