RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 CARD16Q5EG05 197 aa27.77■■■□□ 2.04
CTDNEP1-201ENST00000318988 EMBQ6PCB8 327 aa27.77■■■□□ 2.04
CTDNEP1-201ENST00000318988 KLHDC8BQ8IXV7 354 aa27.77■■■□□ 2.04
CTDNEP1-201ENST00000318988 TBL1YQ9BQ87 522 aa27.77■■■□□ 2.04
CTDNEP1-201ENST00000318988 FICDQ9BVA6 458 aa27.77■■■□□ 2.04
CTDNEP1-201ENST00000318988 DUSP12Q9UNI6 340 aa27.77■■■□□ 2.04
CTDNEP1-201ENST00000318988 TTC34A8MYJ7 566 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 AP3B1O00203 1094 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 PON2Q15165 354 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 SLC44A4Q53GD3 710 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 SERPINA13PQ6UXR4 307 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 CENPUQ71F23 418 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 SFTPA1Q8IWL2 248 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 DNAAF3Q8N9W5 541 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 FBRSL1Q9HCM7 1045 aaKnown RBP27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 PRUNE2Q8WUY3 3088 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 KIAA1549LQ6ZVL6 1849 aa27.76■■■□□ 2.03
CTDNEP1-201ENST00000318988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 PPFIA2O75334 1257 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 GJB3O75712 270 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 ZNF234Q14588 700 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 NCEH1Q6PIU2 408 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 TXNDC11Q6PKC3 985 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 KDELC1Q6UW63 502 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 Q6ZVU0 165 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 KDELC2Q7Z4H8 507 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 PLPP6Q8IY26 295 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 TADA1Q96BN2 335 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 MRGPRX2Q96LB1 330 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 SERPINB12Q96P63 405 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 EVLQ9UI08 416 aaPredicted RBP27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 SORCS3Q9UPU3 1222 aa27.75■■■□□ 2.03
CTDNEP1-201ENST00000318988 ZNF821O75541 412 aaPredicted RBP27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 MLNP12872 115 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 DRD1P21728 446 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 MYLK3Q32MK0 819 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 DNAJC21Q5F1R6 531 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 LRRC8BQ6P9F7 803 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 PAF1Q8N7H5 531 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 OR6K2Q8NGY2 324 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 ATXN2LQ8WWM7 1075 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 PWWP2AQ96N64 755 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 ATP13A3Q9H7F0 1226 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 THAP10Q9P2Z0 257 aaPredicted RBP27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 STARD13Q9Y3M8 1113 aa27.74■■■□□ 2.03
CTDNEP1-201ENST00000318988 NPC1O15118 1278 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 USP12O75317 370 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 POP4O95707 220 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 FAM153BP0C7A2 387 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 BCL2L1Q07817 233 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 GRM3Q14832 879 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 SLMAPQ14BN4 828 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 FAM153CQ494X1 144 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 AENQ8WTP8 325 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 FRS2Q8WU20 508 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 MYO19Q96H55 970 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 FEM1CQ96JP0 617 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 APOL2Q9BQE5 337 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 ARIH1Q9Y4X5 557 aaPredicted RBP27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 RAI2Q9Y5P3 530 aa27.73■■■□□ 2.03
CTDNEP1-201ENST00000318988 DYNC1I1O14576 645 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 EIF3HO15372 352 aaKnown RBP eCLIP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 AGTP01019 485 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 CCNHP51946 323 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 CDK18Q07002 472 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 CDH17Q12864 832 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 BBS9Q3SYG4 887 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 TMEM196Q5HYL7 178 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 TPRG1Q6ZUI0 275 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 OR52K1Q8NGK4 314 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 FAM3CQ92520 227 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 PCDHGC4Q9Y5F7 938 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 MIA3Q5JRA6 1907 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 EDDM13A0A1B0GTR0 161 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 MAN2B1O00754 1011 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 ADRA1AP35348 466 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 GRIA1P42261 906 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 SEC13P55735 322 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 DHX9Q08211 1270 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 PDIA2Q13087 525 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 OLIG2Q13516 323 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 FNBP1LQ5T0N5 605 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 EGFLAMQ63HQ2 1017 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 DPY19L3Q6ZPD9 716 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 CAND1Q86VP6 1230 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 ZNF513Q8N8E2 541 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 PDCD6IPQ8WUM4 868 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 HNRNPLLQ8WVV9 542 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 TUBGCP5Q96RT8 1024 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 PHACTR1Q9C0D0 580 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 ZDHHC6Q9H6R6 413 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 ARFGAP3Q9NP61 516 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 SAYSD1Q9NPB0 183 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 CASS4Q9NQ75 786 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 SUN2Q9UH99 717 aa27.72■■■□□ 2.03
CTDNEP1-201ENST00000318988 K7EQS6 105 aa27.71■■■□□ 2.03
CTDNEP1-201ENST00000318988 EPOP01588 193 aa27.71■■■□□ 2.03
CTDNEP1-201ENST00000318988 HNRNPLP14866 589 aaKnown RBP eCLIP27.71■■■□□ 2.03
CTDNEP1-201ENST00000318988 H2AFXP16104 143 aaPredicted RBP27.71■■■□□ 2.03
CTDNEP1-201ENST00000318988 SERPINA4P29622 427 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms