RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 GDPD5Q8WTR4 605 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 TMEM40Q8WWA1 233 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CNDP1Q96KN2 507 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CNBD2Q96M20 576 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CATSPERZQ9NTU4 200 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 WWOXQ9NZC7 414 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 TRIM16O95361 564 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 TOP3BO95985 862 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PRKCHP24723 683 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PPIDQ08752 370 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 SPRED3Q2MJR0 410 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 GSTCDQ8NEC7 633 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 MAGEC3Q8TD91 643 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 MIEF2Q96C03 454 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 GPR32O75388 356 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 BEST1O76090 585 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PSEN1P49768 467 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 SLC10A2Q12908 348 aaPredicted RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CRHR2Q13324 411 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PFKFB4Q16877 469 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 CFAP52Q8N1V2 620 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PCDH20Q8N6Y1 951 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 OR52K2Q8NGK3 314 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 RDH11Q8TC12 318 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 EBF4Q9BQW3 602 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 TAS2R1Q9NYW7 299 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PDP2Q9P2J9 529 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 MYO18AQ92614 2054 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 ITGB6P18564 788 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 MRPS22P82650 360 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 DUSP4Q13115 394 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 PLD1Q13393 1074 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 GALNT3Q14435 633 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 SNX19Q92543 992 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 AGO3Q9H9G7 860 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 WDR41Q9HAD4 459 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 MRASO14807 208 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 SIN3BO75182 1162 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 BAIAP3O94812 1187 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 LRG1P02750 347 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 ANKS6Q68DC2 871 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 DENND1CQ8IV53 801 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 DENND6AQ8IWF6 608 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 NXNL1Q96CM4 212 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 HAUS8Q9BT25 410 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 PNPLA8Q9NP80 782 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 BTN3A1O00481 513 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 CCL22O00626 93 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 CDK18Q07002 472 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 FOXD4Q12950 439 aaPredicted RBP13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 MSLNQ13421 630 aaPredicted RBP13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 ARHGEF7Q14155 803 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 SBF2Q86WG5 1849 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 ATP6AP2A0A1C7CYW4 349 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 MATN3O15232 486 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 IRAK2O43187 625 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 ATP6AP2O75787 350 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 PTGR2Q8N8N7 351 aaPredicted RBP13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 BTN2A3PQ96KV6 586 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 GATA5Q9BWX5 397 aaPredicted RBP13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 FTHL17Q9BXU8 183 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 SLC39A8Q9C0K1 460 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 VWA7Q9Y334 891 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 SLC4A7Q9Y6M7 1214 aa13.54□□□□□ -0.24
PCDHB9-201ENST00000316105 RGSL1A5PLK6 1076 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 ITGALP20701 1170 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 NEK3P51956 506 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 EPHB3P54753 998 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 DSC2Q02487 901 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 NFYCQ13952 458 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 HECTD3Q5T447 861 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 ZNF781Q8N8C0 355 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 KBTBD7Q8WVZ9 684 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 RCN3Q96D15 328 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 PSMD12O00232 456 aaPredicted RBP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 ANPEPP15144 967 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 MTA1Q13330 715 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 ZNF460Q14592 562 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 KHDC1Q4VXA5 237 aaKnown RBP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 RFWD3Q6PCD5 774 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 LDB1Q86U70 411 aaPredicted RBP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 OR6Y1Q8NGX8 325 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 VPS45Q9NRW7 570 aa13.53□□□□□ -0.24
PCDHB9-201ENST00000316105 CROTQ9UKG9 612 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms