RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ITIH2P19823 946 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 RFC1P35251 1148 aaPredicted RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 PFN3P60673 137 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 TLE3Q04726 772 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 POLD3Q15054 466 aaPredicted RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 CT47A1Q5JQC4 288 aaPredicted RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 LRRC73Q5JTD7 316 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 CDKAL1Q5VV42 579 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 STRADAQ7RTN6 431 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 SPACA3Q8IXA5 215 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 PYROXD2Q8N2H3 581 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 OR2AP1Q8NGE2 309 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 ENOX1Q8TC92 643 aaKnown RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 IFI44Q8TCB0 444 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 FAM172AQ8WUF8 416 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 ASB12Q8WXK4 309 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 RAB7BQ96AH8 199 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 CENPTQ96BT3 561 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 KLHL32Q96NJ5 620 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 KLC2Q9H0B6 622 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 TCEAL2Q9H3H9 227 aaPredicted RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 IPO11Q9UI26 975 aaKnown RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 PNMA8BQ9ULN7 279 aaPredicted RBP17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 HPCAL4Q9UM19 191 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 CSNK1G3Q9Y6M4 447 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 ZNF462Q96JM2 2506 aa17.72■□□□□ 0.43
EXOSC4-201ENST00000316052 COL27A1Q8IZC6 1860 aaPredicted RBP17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 NEMP1O14524 444 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 AREL1O15033 823 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 RAMP2O60895 175 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 USP12O75317 370 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 CSO75390 466 aaKnown RBP17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 KRT3P12035 628 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 JUNDP17535 347 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 ANP32AP39687 249 aaKnown RBP17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 DUSP3P51452 185 aaPredicted RBP17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 SNRPD1P62314 119 aaKnown RBP17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 CDKN3Q16667 212 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 DEFB133Q30KQ1 61 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 WDR59Q6PJI9 974 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 LMX1AQ8TE12 382 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 FCRL3Q96P31 734 aaPredicted RBP17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 DEPDC7Q96QD5 511 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 ABCG4Q9H172 646 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 USP29Q9HBJ7 922 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 SIK3Q9Y2K2 1263 aa17.71■□□□□ 0.43
EXOSC4-201ENST00000316052 LRRK1Q38SD2 2015 aa17.71■□□□□ 0.42
EXOSC4-201ENST00000316052 PIEZO2Q9H5I5 2752 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 CPED1A4D0V7 1026 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 AQP9O43315 295 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 BUB1O43683 1085 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 GCATO75600 419 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 TMCC1O94876 653 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 TGM2P21980 687 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 GEMIN4P57678 1058 aaKnown RBP17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 GABREP78334 506 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 ZCCHC8Q6NZY4 707 aaKnown RBP17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 GUSBP11Q6P575 273 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 GDPD4Q6W3E5 623 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 TTC7BQ86TV6 843 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 ZSCAN30Q86W11 494 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 RBFAQ8N0V3 343 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 DENND6BQ8NEG7 585 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 MAPK15Q8TD08 544 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 SLC39A7Q92504 469 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 NTAN1Q96AB6 310 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 NAF1Q96HR8 494 aaKnown RBP17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 HIC2Q96JB3 615 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 ADAM22Q9P0K1 906 aa17.7■□□□□ 0.42
EXOSC4-201ENST00000316052 A0A1W2PNU3 283 aaPredicted RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 H3BM21 787 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 CASC3O15234 703 aaKnown RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 ATXN7O15265 892 aaPredicted RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 MMP20O60882 483 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 C1QL1O75973 258 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 TIMP2P16035 220 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 IGFALSP35858 605 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 STAT1P42224 750 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 LSSP48449 732 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 GSCP56915 257 aaPredicted RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 CLEC16AQ2KHT3 1053 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 TRIM72Q6ZMU5 477 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 VPS36Q86VN1 386 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 PHF13Q86YI8 300 aaPredicted RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 ZNF578Q96N58 590 aaPredicted RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 OSBPL1AQ9BXW6 950 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 TTYH3Q9C0H2 523 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 MBNL1Q9NR56 388 aaKnown RBP17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 FANCLQ9NW38 375 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
EXOSC4-201ENST00000316052 TCRBV5S1A1TA0A578 114 aa17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 SIGLEC16A6NMB1 481 aa17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 INSIG1O15503 277 aa17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 DXOO77932 396 aaKnown RBP17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 GPD1P21695 349 aa17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 NSFP46459 744 aaKnown RBP17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 C1orf61Q13536 156 aa17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 ISXQ2M1V0 245 aa17.68■□□□□ 0.42
EXOSC4-201ENST00000316052 EFL1Q7Z2Z2 1120 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms