RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TXNDC8Q6A555 127 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 LRRC8BQ6P9F7 803 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 CEP128Q6ZU80 1094 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 NUDCD3Q8IVD9 361 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 LRRC43Q8N309 656 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TMEM169Q96HH4 297 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 YME1L1Q96TA2 773 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 OXCT2Q9BYC2 517 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 PHACTR1Q9C0D0 580 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TLE6Q9H808 572 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 IARS2Q9NSE4 1012 aaKnown RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 NDE1Q9NXR1 346 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 STX18Q9P2W9 335 aaKnown RBP7.71□□□□□ -1.18
TRIM55-202ENST00000315962 TLR6Q9Y2C9 796 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 PCDHA11Q9Y5I1 949 aa7.71□□□□□ -1.18
TRIM55-202ENST00000315962 CCDC160A6NGH7 325 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 NRG2O14511 850 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 AURKAO14965 403 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 COCHO43405 550 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 RFPL1O75677 317 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 KRT37O76014 449 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 AP2A1O95782 977 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ALDOAP04075 364 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 POLBP06746 335 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 SNRPAP09012 282 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 FDFT1P37268 417 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GLRBP48167 497 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 AQP4P55087 323 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ROR2Q01974 943 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 DLG1Q12959 904 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 LAMB3Q13751 1172 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CNGA3Q16281 694 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 USP41Q3LFD5 358 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ARTNQ5T4W7 220 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 STXBP5Q5T5C0 1151 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ESRP1Q6NXG1 681 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ANKS3Q6ZW76 656 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 STRA8Q7Z7C7 330 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GALNT15Q8N3T1 639 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 OR7D4Q8NG98 312 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 PDCD6IPQ8WUM4 868 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ITFG2Q969R8 447 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 E2F7Q96AV8 911 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 HDAC11Q96DB2 347 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 DHRS4Q9BTZ2 278 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CWH43Q9H720 699 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 XAB2Q9HCS7 855 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 PNPLA8Q9NP80 782 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 SAR1AQ9NR31 198 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CLIC5Q9NZA1 410 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 BFARQ9NZS9 450 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CXXC1Q9P0U4 656 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 MTF2Q9Y483 593 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 KCTD3Q9Y597 815 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 SHROOM3Q8TF72 1996 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 PDCD11Q14690 1871 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ARHGEF37A1IGU5 675 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 OR51F1A6NGY5 319 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CIB2O75838 187 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 PROCP04070 461 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 NCF2P19878 526 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 TPSB2P20231 275 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GRIA2P42262 883 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 RPS6KA3P51812 740 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ZXDBP98169 803 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 IRF9Q00978 393 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 TWF1Q12792 350 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GK3PQ14409 553 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 TPSAB1Q15661 275 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CNPY1Q3B7I2 92 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GRAMD1BQ3KR37 738 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 SATL1Q86VE3 508 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 RTL3Q8N8U3 475 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 MCUQ8NE86 351 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 OR6K2Q8NGY2 324 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GATA6Q92908 595 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 IFT43Q96FT9 208 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 FUBP3Q96I24 572 aaKnown RBP eCLIP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 HAPLN3Q96S86 360 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ECSITQ9BQ95 431 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 OSBPL2Q9H1P3 480 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 GBA3Q9H227 469 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 SUDS3Q9H7L9 328 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 CATSPERBQ9H7T0 1116 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 MOCS1Q9NZB8 636 aa7.7□□□□□ -1.18
TRIM55-202ENST00000315962 MTO1Q9Y2Z2 717 aaKnown RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 ZFP37Q9Y6Q3 630 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-202ENST00000315962 KLHL33A6NCF5 533 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 SPECC1L-ADORA2AF8WAN1 911 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 TMEM189-UBE2V1I3L0A0 370 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 CBX4O00257 560 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 MUSKO15146 869 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 TM9SF1O15321 606 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 INPPL1O15357 1258 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 PHGDHO43175 533 aaKnown RBP7.69□□□□□ -1.18
TRIM55-202ENST00000315962 BNIP3LO60238 219 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 ATP6V1B1P15313 513 aa7.69□□□□□ -1.18
TRIM55-202ENST00000315962 NELFEP18615 380 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms