RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 COPG1Q9Y678 874 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TMEM131Q92545 1883 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ZNF701M0R085 212 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CAPN9O14815 690 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 NVLO15381 856 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ZBTB24O43167 697 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PAPSS2O95340 614 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 COL6A2P12110 1019 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PSMB4P28070 264 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 NMBRP28336 390 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ADRA1BP35368 520 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 FDFT1P37268 417 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PXNP49023 591 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CSE1LP55060 971 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 GNPTABQ3T906 1256 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 AGMOQ6ZNB7 445 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 USP37Q86T82 979 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ISCA2Q86U28 154 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 RTN4RL1Q86UN2 441 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PJA1Q8NG27 643 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 BPIFB1Q8TDL5 484 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 BIRC8Q96P09 236 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 DEFB118Q96PH6 123 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TUBB6Q9BUF5 446 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PLVAPQ9BX97 442 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ZWILCHQ9H900 591 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ALG13Q9NP73 1137 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ERAP1Q9NZ08 941 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 FNIP2Q9P278 1114 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PRPF19Q9UMS4 504 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SERTM1A2A2V5 107 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SMIM23A6NLE4 172 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TMEM189-UBE2V1I3L0A0 370 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 MUSKO15146 869 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 LILRB3O75022 631 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 KIAA0754O94854 1291 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 MATN4O95460 622 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 XRCC1P18887 633 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 USP8P40818 1118 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SERPINB9P50453 376 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PRKAA2P54646 552 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 IRX1P78414 480 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CRADDP78560 199 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SLC25A3Q00325 362 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PLOD1Q02809 727 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 POLD3Q15054 466 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 DCAF4L1Q3SXM0 396 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 MGAT5BQ3V5L5 792 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CCDC153Q494R4 210 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SLC36A3Q495N2 470 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 WDR44Q5JSH3 913 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 HPS6Q86YV9 775 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TTC39CQ8N584 583 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CCDC33Q8N5R6 958 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 RSAD2Q8WXG1 361 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PTERQ96BW5 349 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 IMP4Q96G21 291 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PAWRQ96IZ0 340 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 FCRL2Q96LA5 508 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TEX37Q96LM6 180 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 LENG8Q96PV6 779 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 CLSTN3Q9BQT9 956 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 HTATIP2Q9BUP3 242 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 TTYH1Q9H313 450 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SUDS3Q9H7L9 328 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 PPARGC1AQ9UBK2 798 aaKnown RBP7.93□□□□□ -1.14
CNOT4-201ENST00000315544 AP4E1Q9UPM8 1137 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 ZNF148Q9UQR1 794 aa7.93□□□□□ -1.14
CNOT4-201ENST00000315544 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 SGK1O00141 431 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 APOL1O14791 398 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 ZNF821O75541 412 aaPredicted RBP7.92□□□□□ -1.14
CNOT4-201ENST00000315544 FDXRP22570 491 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 MAGEA10P43363 369 aaPredicted RBP7.92□□□□□ -1.14
CNOT4-201ENST00000315544 CCT8P50990 548 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 GRSF1Q12849 480 aaKnown RBP eCLIP7.92□□□□□ -1.14
CNOT4-201ENST00000315544 CHI3L2Q15782 390 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 PRAMEF19Q5SWL8 479 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 N4BP2L1Q5TBK1 243 aaPredicted RBP7.92□□□□□ -1.14
CNOT4-201ENST00000315544 KAZNQ674X7 775 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 NAIF1Q69YI7 327 aaPredicted RBP7.92□□□□□ -1.14
CNOT4-201ENST00000315544 C16orf46Q6P387 395 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 SLC27A1Q6PCB7 646 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 MSRB3Q8IXL7 192 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 BEST2Q8NFU1 509 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 OR10T2Q8NGX3 314 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 RNF139Q8WU17 664 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 NT5C1AQ9BXI3 368 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 TRIM4Q9C037 500 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 TMEM45AQ9NWC5 275 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 RAB26Q9ULW5 256 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 CPAMD8Q8IZJ3 1885 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 H3BMM5 538 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 MCF2LO15068 1137 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 MARCH6O60337 910 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 HRH2P25021 359 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 SLC26A3P40879 764 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 ACADVLP49748 655 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 VPS41P49754 854 aa7.92□□□□□ -1.14
CNOT4-201ENST00000315544 TMEM132DQ14C87 1099 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms