RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FICDQ9BVA6 458 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TLR10Q9BXR5 811 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 BRD9Q9H8M2 597 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CLK4Q9HAZ1 481 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 TXNRD2Q9NNW7 524 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 COMMD9Q9P000 198 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TNFSF13BQ9Y275 285 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 DRG1Q9Y295 367 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 SRRM3A6NNA2 597 aaPredicted RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 ANXA6P08133 673 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 GZMAP12544 262 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 MSH3P20585 1137 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 THOC7Q6I9Y2 204 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 KLHL24Q6TFL4 600 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TRIM74Q86UV6 250 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TRIM73Q86UV7 250 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 WDR49Q8IV35 697 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 HTRA1Q92743 480 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PROX1Q92786 737 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 COX4I2Q96KJ9 171 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 WDCPQ9H6R7 721 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 MID1IP1Q9NPA3 183 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 RAD18Q9NS91 495 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ADPRHL2Q9NX46 363 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PACSIN3Q9UKS6 424 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 VANGL2Q9ULK5 521 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 USP18Q9UMW8 372 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 AP4B1Q9Y6B7 739 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 IGKV6D-41A0A0C4DH26 115 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 FAM86B1E9PN63 330 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 PLOD3O60568 738 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 KATNA1O75449 491 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 WFS1O76024 890 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 RB1P06400 928 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 FAM86B2P0C5J1 330 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 RXRGP48443 463 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ARF5P84085 180 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ZFP69Q49AA0 526 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 PMF1Q6P1K2 205 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 PROSER1Q86XN7 944 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ADHFE1Q8IWW8 467 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 FAM126BQ8IXS8 530 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 KBTBD8Q8NFY9 601 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 FAR1Q8WVX9 515 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SCLYQ96I15 445 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 MARK4Q96L34 752 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 GANQ9H2C0 597 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ZNF221Q9UK13 617 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TREHO43280 583 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 CCNKO75909 580 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 RARAP10276 462 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 NELFEP18615 380 aaKnown RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 GSTM5P46439 218 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 NPY2RP49146 381 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 BCAP31P51572 246 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ARPC4P59998 168 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ZNF544Q6NX49 715 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SFRP1Q8N474 314 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 LEMD2Q8NC56 503 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 FBXO30Q8TB52 745 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TBCDQ9BTW9 1192 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SLITRK2Q9H156 845 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SQORQ9Y6N5 450 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 BCLAF3A2AJT9 711 aaKnown RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 EME2A4GXA9 379 aaPredicted RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 ABLIM1O14639 778 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ERCC2P18074 760 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TNFRSF8P28908 595 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TRIM32Q13049 653 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 MSLNQ13421 630 aaPredicted RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 FRG1Q14331 258 aaKnown RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 PHKG1Q16816 387 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SLC25A24Q6NUK1 477 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ZNF540Q8NDQ6 660 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 FAM172AQ8WUF8 416 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SYT15Q9BQS2 421 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 PDCD10Q9BUL8 212 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 RUSC1Q9BVN2 902 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 IL25Q9H293 177 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 ELOVL6Q9H5J4 265 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 POMKQ9H5K3 350 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 DNAJC18Q9H819 358 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TMEM138Q9NPI0 162 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 CMTM6Q9NX76 183 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TOR4AQ9NXH8 423 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 SLC25A13Q9UJS0 675 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 MEIS2O14770 477 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 RECQL4O94761 1208 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 COX4I1P13073 169 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 UQCRBP14927 111 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 NPR3P17342 541 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 NOS3P29474 1203 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 TBX2Q13207 712 aaPredicted RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 HSDL1Q3SXM5 330 aa8.26□□□□□ -1.09
VPS41-202ENST00000310301 INO80DQ53TQ3 878 aaPredicted RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 DNAJC14Q6Y2X3 702 aaPredicted RBP8.26□□□□□ -1.09
VPS41-202ENST00000310301 EIF3MQ7L2H7 374 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms