RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MID2Q9UJV3 735 aa11.68□□□□□ -0.54
PTPN2-201ENST00000309660 BPTFQ12830 3046 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 AP3B1O00203 1094 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 IGLV3-25P01717 112 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ENO3P13929 434 aaPredicted RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ARSAP15289 507 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 PEX19P40855 299 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 MAGEA12P43365 314 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 GATMP50440 423 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ACTR3P61158 418 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 DSC3Q14574 896 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 CLLU1OSQ5K130 101 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 RTN4RL1Q86UN2 441 aaPredicted RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 DCP1BQ8IZD4 617 aaKnown RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 BLOC1S5Q8TDH9 187 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 GIPC2Q8TF65 315 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 TSGA13Q96PP4 275 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 NACA2Q9H009 215 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 SUDS3Q9H7L9 328 aaPredicted RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 TBC1D13Q9NVG8 400 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 SORCS3Q9UPU3 1222 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 KCTD3Q9Y597 815 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 HDAC3O15379 428 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 TCN1P20061 433 aaPredicted RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 CCNG1P51959 295 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 KLC1Q07866 573 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 SREBF2Q12772 1141 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 DLG1Q12959 904 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 SH2D4BQ5SQS7 431 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 TMEM154Q6P9G4 183 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 EPGNQ6UW88 154 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ZYG11AQ6WRX3 759 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ACAD11Q709F0 780 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 RPAINQ86UA6 219 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 MON1AQ86VX9 555 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 SNX31Q8N9S9 440 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 HEXDCQ8WVB3 486 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 GLT1D1Q96MS3 346 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 POMKQ9H5K3 350 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 ARHGAP26Q9UNA1 814 aa11.67□□□□□ -0.54
PTPN2-201ENST00000309660 LAMA2P24043 3122 aaKnown RBP11.67□□□□□ -0.54
PTPN2-201ENST00000309660 SCAMP3O14828 347 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CAP1Q01518 475 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 TAF10Q12962 218 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CAPRIN2Q6IMN6 1127 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 POTEHQ6S545 545 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 KBTBD2Q8IY47 623 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 MAB21L3Q8N8X9 362 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 GPAMQ9HCL2 828 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 MARCH2Q9P0N8 246 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 DLGAP2Q9P1A6 1054 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CDH22Q9UJ99 828 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 RAP2CQ9Y3L5 183 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 MTF2Q9Y483 593 aaPredicted RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CA12O43570 354 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CABYRO75952 493 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 SLC10A3P09131 477 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 SBK3P0C264 359 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CCDC166P0CW27 439 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CKBP12277 381 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 ITGAXP20702 1163 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 OR1E1P30953 314 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 RENBPP51606 427 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 PKNOX1P55347 436 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CDK18Q07002 472 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 MS4A13Q5J8X5 152 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 HDAC10Q969S8 669 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 UROC1Q96N76 676 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 SPON2Q9BUD6 331 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 ZYG11BQ9C0D3 744 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 NOL6Q9H6R4 1146 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 BATF3Q9NR55 127 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 GEMIN8Q9NWZ8 242 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 PCDHB5Q9Y5E4 795 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 SCN10AQ9Y5Y9 1956 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 APOA4P06727 396 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 ARCN1P48444 511 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 SERPINH1P50454 418 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 INHBEP58166 350 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 NFE2Q16621 373 aaPredicted RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 GEN1Q17RS7 908 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 FBXL22Q6P050 247 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 RNF180Q86T96 592 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 DPF3Q92784 378 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 ISL2Q96A47 359 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 EXOC2Q96KP1 924 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms