RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 FAM126AQ9BYI3 521 aaPredicted RBP4.06□□□□□ -1.76
USH2A-201ENST00000307340 ELOVL6Q9H5J4 265 aa4.06□□□□□ -1.76
USH2A-201ENST00000307340 DHX35Q9H5Z1 703 aaKnown RBP4.06□□□□□ -1.76
USH2A-201ENST00000307340 NRXN3Q9Y4C0 1643 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 CA12O43570 354 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SNHG28P0DPA3 235 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SERPINA4P29622 427 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 MATKP42679 507 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 NEK3P51956 506 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 PSMC6P62333 389 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TYSND1Q2T9J0 566 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 RALGPS2Q86X27 583 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 IPMKQ8NFU5 416 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 PTTG3PQ9NZH4 202 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TTC3P53804 2025 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SNX3O60493 162 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 RAMP2O60895 175 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 KCNA2P16389 499 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 UBE3AQ05086 875 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 STX4Q12846 297 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SH3KBP1Q96B97 665 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 GSTM3P21266 225 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 KLRC1P26715 233 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 UGT1A5P35504 534 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 FLT3P36888 993 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SGF29Q96ES7 293 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 PURBQ96QR8 312 aaKnown RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 NPHS2Q9NP85 383 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ITM2CQ9NQX7 267 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 DDX20Q9UHI6 824 aaKnown RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 LEF1Q9UJU2 399 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 ENTPD4Q9Y227 616 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 CHP2O43745 196 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TRIM3O75382 744 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 CYP2D6P10635 497 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 HSD3B1P14060 373 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 EFNA1P20827 205 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 HSD3B2P26439 372 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SEC23BQ15437 767 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 HABP4Q5JVS0 413 aaKnown RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 VARS2Q5ST30 1063 aaKnown RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 TOP6BLQ8N6T0 577 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ZNF594Q96JF6 807 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 CHORDC1Q9UHD1 332 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 PYCARDQ9ULZ3 195 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 GIT1Q9Y2X7 761 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ALOX15BO15296 676 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SUPT7LO94864 414 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 WDR24Q96S15 920 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 GPR63Q9BZJ6 419 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SLC39A10Q9ULF5 831 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 COQ4Q9Y3A0 265 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TSC22D4Q9Y3Q8 395 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 DTNAQ9Y4J8 743 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 A0A0B4J269 797 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 AQP12BA6NM10 295 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 DPYSL4O14531 572 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 HAT1O14929 419 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 PRPS2P11908 318 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ITGA4P13612 1032 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ITGA8P53708 1063 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TUBB3Q13509 450 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 KLHL22Q53GT1 634 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 EIPR1Q53HC9 387 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ANKS6Q68DC2 871 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 MON1AQ86VX9 555 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 REXO1L1PQ8IX06 675 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 AQP12AQ8IXF9 295 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 MCOLN2Q8IZK6 566 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TATDN2Q93075 761 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 ELMO2Q96JJ3 720 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 HINFPQ9BQA5 517 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 CST8O60676 142 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 MAPKAPK2P49137 400 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 POU4F2Q12837 409 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 CRY2Q49AN0 593 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 RUNDC3AQ59EK9 446 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 CCDC103Q8IW40 242 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 KLHDC8BQ8IXV7 354 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 WNT8BQ93098 351 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 PAFAH2Q99487 392 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TRIM51Q9BSJ1 452 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 WDR18Q9BV38 432 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 REEP1Q9H902 201 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 RBM12Q9NTZ6 932 aaKnown RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 SPATA7Q9P0W8 599 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 GABBR1Q9UBS5 961 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 GPN3Q9UHW5 284 aaPredicted RBP4.05□□□□□ -1.76
USH2A-201ENST00000307340 RHPN2P1A8MT19 583 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SOCS5O75159 536 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 DHFRP00374 187 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 C8GP07360 202 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 FCGRTP55899 365 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 S100A7AQ86SG5 101 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 FAM13CQ8NE31 585 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 SERAC1Q96JX3 654 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 TMEM74Q96NL1 305 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 GORASP1Q9BQQ3 440 aa4.05□□□□□ -1.76
USH2A-201ENST00000307340 HDHD5Q9BXW7 423 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms