RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CDK5RAP1Q96SZ6 601 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FFAR3O14843 346 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 GPR42O15529 346 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 NR1H2P55055 460 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 MPPE1Q53F39 396 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TRIM74Q86UV6 250 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TRIM73Q86UV7 250 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 CATSPERZQ9NTU4 200 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ZMPSTE24O75844 475 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 SLC7A2P52569 658 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 COMTD1Q86VU5 262 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 CEP295NLQ96MC4 621 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 SSX5O60225 188 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 THEGLP0DJG4 465 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TUBA1BP68363 451 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ROR2Q01974 943 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TUBA1AQ71U36 451 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 SLC34A3Q8N130 599 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 CDHR5Q9HBB8 845 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TEX14Q8IWB6 1497 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 CPT1AP50416 773 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 TUBA3EQ6PEY2 450 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 FRMD7Q6ZUT3 714 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 GALNT5Q7Z7M9 940 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 C10orf107Q8IVU9 208 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 OR10H5Q8NGA6 315 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 CNTNAP2Q9UHC6 1331 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MAGEB16A2A368 324 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 OGTO15294 1046 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MUTP22033 750 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 BCAT1P54687 386 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ACE2Q9BYF1 805 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 NAALADL1Q9UQQ1 740 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 A0A087X1B8 175 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 LRATO95237 230 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 HMGCRP04035 888 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 CD40LGP29965 261 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 TBL1YQ9BQ87 522 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 UPB1Q9UBR1 384 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 SLC24A2Q9UI40 661 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 NCKAP1Q9Y2A7 1128 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 PPEF2O14830 753 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 CCR1P32246 355 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 RENBPP51606 427 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 E2F2Q14209 437 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 PDIA5Q14554 519 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 LDLRAP1Q5SW96 308 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 HMBOX1Q6NT76 420 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 POMZP3Q6PJE2 187 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 SNX20Q7Z614 316 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 FAM131BQ86XD5 332 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MASTLQ96GX5 879 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 SPATA9Q9BWV2 254 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MED11Q9P086 117 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MYMKA6NI61 221 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 NRP2O60462 931 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 RARGP13631 454 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 PRDX5P30044 214 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 SATL1Q86VE3 508 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MMP10P09238 476 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 OR1E1P30953 314 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 RGS8P57771 180 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ENPEPQ07075 957 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ABRQ12979 859 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 KLHDC7AQ5VTJ3 777 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 RAP1GAP2Q684P5 730 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 OR4A15Q8NGL6 344 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 TTLL2Q9BWV7 592 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ARL5AQ9Y689 179 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 SLC28A2O43868 658 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 USP12O75317 370 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 GP5P40197 560 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 INSCQ1MX18 579 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■□□□ 12.2
TRIM56-201ENST00000306085 NOS2P35228 1153 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 MLLT6P55198 1093 aaPredicted RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 PITRM1Q5JRX3 1037 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 BORCS5Q969J3 196 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 COLEC11Q9BWP8 271 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ABCG8Q9H221 673 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 CLK4Q9HAZ1 481 aaKnown RBP13.5□□□□□ -0.25
TRIM56-201ENST00000306085 PRDM8Q9NQV8 689 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
TRIM56-201ENST00000306085 SAGE2PA6NJ88 616 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SGPL1O95470 568 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 PGAM1P18669 254 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SLC6A2P23975 617 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 RPP38P78345 283 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 CRTC3Q6UUV7 619 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TMPRSS11AQ6ZMR5 421 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 QSOX2Q6ZRP7 698 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms